Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Gm22175-201ENSMUST00000175007 78 ntBASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Gm27622-201ENSMUST00000183779 60 ntBASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ptchd3Q0EEE2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Gm13616-201ENSMUST00000120600 222 ntBASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Gm38294-201ENSMUST00000192831 381 ntBASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Gm18027-201ENSMUST00000218947 619 ntBASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Gm16476-201ENSMUST00000221544 139 ntBASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ptchd3Q0EEE2 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms