Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
SgcbP82349 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SgcbP82349 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.94□□□□□ -0.5
SgcbP82349 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.94□□□□□ -0.5
SgcbP82349 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.93□□□□□ -0.5
SgcbP82349 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.93□□□□□ -0.5
SgcbP82349 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.93□□□□□ -0.5
SgcbP82349 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SgcbP82349 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
SgcbP82349 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SgcbP82349 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SgcbP82349 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.93□□□□□ -0.5
SgcbP82349 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SgcbP82349 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.93□□□□□ -0.5
SgcbP82349 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
SgcbP82349 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Gm27892-201ENSMUST00000185017 106 ntBASIC11.93□□□□□ -0.5
SgcbP82349 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.93□□□□□ -0.5
SgcbP82349 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
SgcbP82349 Gm17794-201ENSMUST00000220252 955 ntBASIC11.93□□□□□ -0.5
SgcbP82349 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SgcbP82349 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.93□□□□□ -0.5
SgcbP82349 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.93□□□□□ -0.5
SgcbP82349 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SgcbP82349 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
SgcbP82349 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SgcbP82349 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
SgcbP82349 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcbP82349 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.92□□□□□ -0.5
SgcbP82349 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SgcbP82349 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
SgcbP82349 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
SgcbP82349 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.92□□□□□ -0.5
SgcbP82349 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
SgcbP82349 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.92□□□□□ -0.5
SgcbP82349 Gm29608-201ENSMUST00000190444 463 ntBASIC11.92□□□□□ -0.5
SgcbP82349 Gm38671-201ENSMUST00000200573 130 ntBASIC11.92□□□□□ -0.5
SgcbP82349 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.92□□□□□ -0.5
SgcbP82349 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.92□□□□□ -0.5
SgcbP82349 Gm26315-201ENSMUST00000083890 321 ntBASIC11.92□□□□□ -0.5
SgcbP82349 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
SgcbP82349 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
SgcbP82349 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms