Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Gm15371-201ENSMUST00000117057 784 ntBASIC13.23□□□□□ -0.29
Pdx1P52946 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.23□□□□□ -0.29
Pdx1P52946 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Pdx1P52946 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.23□□□□□ -0.29
Pdx1P52946 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Pdx1P52946 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.23□□□□□ -0.29
Pdx1P52946 Gm9794-201ENSMUST00000202370 423 ntBASIC13.23□□□□□ -0.29
Pdx1P52946 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.23□□□□□ -0.29
Pdx1P52946 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pdx1P52946 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.23□□□□□ -0.29
Pdx1P52946 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pdx1P52946 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pdx1P52946 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.22□□□□□ -0.29
Pdx1P52946 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.22□□□□□ -0.29
Pdx1P52946 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.22□□□□□ -0.29
Pdx1P52946 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Pdx1P52946 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.22□□□□□ -0.29
Pdx1P52946 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.22□□□□□ -0.29
Pdx1P52946 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.22□□□□□ -0.29
Pdx1P52946 Gm44397-201ENSMUST00000195950 113 ntBASIC13.22□□□□□ -0.29
Pdx1P52946 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.22□□□□□ -0.29
Pdx1P52946 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdx1P52946 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.22□□□□□ -0.29
Pdx1P52946 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Pdx1P52946 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdx1P52946 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pdx1P52946 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdx1P52946 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.21□□□□□ -0.29
Pdx1P52946 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdx1P52946 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.21□□□□□ -0.29
Pdx1P52946 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdx1P52946 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Pdx1P52946 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdx1P52946 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdx1P52946 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdx1P52946 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdx1P52946 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdx1P52946 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdx1P52946 Gm12490-201ENSMUST00000120255 560 ntBASIC13.21□□□□□ -0.29
Pdx1P52946 Gm11918-201ENSMUST00000121660 179 ntBASIC13.21□□□□□ -0.29
Pdx1P52946 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pdx1P52946 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.21□□□□□ -0.29
Pdx1P52946 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdx1P52946 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.21□□□□□ -0.29
Pdx1P52946 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdx1P52946 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Pdx1P52946 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdx1P52946 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pdx1P52946 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdx1P52946 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdx1P52946 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdx1P52946 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pdx1P52946 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pdx1P52946 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms