Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.27□□□□□ -0.45
Nkx2-2P42586 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.27□□□□□ -0.45
Nkx2-2P42586 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.27□□□□□ -0.45
Nkx2-2P42586 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.27□□□□□ -0.45
Nkx2-2P42586 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.27□□□□□ -0.45
Nkx2-2P42586 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.27□□□□□ -0.45
Nkx2-2P42586 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.27□□□□□ -0.45
Nkx2-2P42586 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.27□□□□□ -0.45
Nkx2-2P42586 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-2P42586 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.27□□□□□ -0.45
Nkx2-2P42586 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.27□□□□□ -0.45
Nkx2-2P42586 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-2P42586 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.26□□□□□ -0.45
Nkx2-2P42586 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Gm5687-201ENSMUST00000118252 640 ntBASIC12.26□□□□□ -0.45
Nkx2-2P42586 Gm6447-201ENSMUST00000118905 835 ntBASIC12.26□□□□□ -0.45
Nkx2-2P42586 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Gm27701-201ENSMUST00000184498 110 ntBASIC12.26□□□□□ -0.45
Nkx2-2P42586 Gm2495-201ENSMUST00000191160 466 ntBASIC12.26□□□□□ -0.45
Nkx2-2P42586 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.26□□□□□ -0.45
Nkx2-2P42586 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-2P42586 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-2P42586 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-2P42586 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-2P42586 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.25□□□□□ -0.45
Nkx2-2P42586 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nkx2-2P42586 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-2P42586 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-2P42586 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-2P42586 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-2P42586 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-2P42586 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-2P42586 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-2P42586 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-2P42586 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-2P42586 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.25□□□□□ -0.45
Nkx2-2P42586 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.25□□□□□ -0.45
Nkx2-2P42586 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-2P42586 Gm8515-201ENSMUST00000194852 576 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms