Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC130669.1-201ENSMUST00000228537 1672 ntBASIC10.84□□□□□ -0.67
Cdx1P18111 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cdx1P18111 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
Cdx1P18111 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx1P18111 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx1P18111 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx1P18111 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx1P18111 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx1P18111 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx1P18111 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx1P18111 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx1P18111 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx1P18111 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx1P18111 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx1P18111 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Cdx1P18111 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx1P18111 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.83□□□□□ -0.68
Cdx1P18111 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdx1P18111 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdx1P18111 Gm11543-201ENSMUST00000120758 370 ntBASIC10.83□□□□□ -0.68
Cdx1P18111 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.83□□□□□ -0.68
Cdx1P18111 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdx1P18111 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC10.83□□□□□ -0.68
Cdx1P18111 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdx1P18111 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Gm5186-201ENSMUST00000218781 920 ntBASIC10.83□□□□□ -0.68
Cdx1P18111 CT009510.1-201ENSMUST00000227972 270 ntBASIC10.83□□□□□ -0.68
Cdx1P18111 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Cdx1P18111 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Cdx1P18111 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cdx1P18111 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Map1b-203ENSMUST00000223725 2669 ntBASIC10.83□□□□□ -0.68
Cdx1P18111 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Cdx1P18111 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cdx1P18111 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cdx1P18111 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx1P18111 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdx1P18111 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx1P18111 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx1P18111 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx1P18111 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx1P18111 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx1P18111 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cdx1P18111 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx1P18111 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx1P18111 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.82□□□□□ -0.68
Cdx1P18111 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx1P18111 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx1P18111 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx1P18111 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx1P18111 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx1P18111 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cdx1P18111 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx1P18111 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cdx1P18111 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx1P18111 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx1P18111 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.82□□□□□ -0.68
Cdx1P18111 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx1P18111 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx1P18111 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx1P18111 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cdx1P18111 Gm7336-201ENSMUST00000107041 1232 ntBASIC10.82□□□□□ -0.68
Cdx1P18111 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx1P18111 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC10.82□□□□□ -0.68
Cdx1P18111 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC10.82□□□□□ -0.68
Cdx1P18111 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC10.82□□□□□ -0.68
Cdx1P18111 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cdx1P18111 AC126408.1-201ENSMUST00000225184 523 ntBASIC10.82□□□□□ -0.68
Cdx1P18111 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC10.82□□□□□ -0.68
Cdx1P18111 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx1P18111 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx1P18111 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.82□□□□□ -0.68
Cdx1P18111 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms