Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rb1P13405 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.76□□□□□ -0.21
Rb1P13405 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rb1P13405 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rb1P13405 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rb1P13405 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rb1P13405 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.76□□□□□ -0.21
Rb1P13405 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rb1P13405 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rb1P13405 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rb1P13405 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rb1P13405 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.76□□□□□ -0.21
Rb1P13405 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rb1P13405 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rb1P13405 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rb1P13405 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rb1P13405 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Rb1P13405 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rb1P13405 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.75□□□□□ -0.21
Rb1P13405 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rb1P13405 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rb1P13405 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rb1P13405 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rb1P13405 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Rb1P13405 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rb1P13405 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
Rb1P13405 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Rb1P13405 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rb1P13405 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rb1P13405 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Rb1P13405 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.75□□□□□ -0.21
Rb1P13405 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Rb1P13405 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rb1P13405 Gm15240-201ENSMUST00000118156 720 ntBASIC13.75□□□□□ -0.21
Rb1P13405 Gm11814-201ENSMUST00000119515 929 ntBASIC13.75□□□□□ -0.21
Rb1P13405 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.75□□□□□ -0.21
Rb1P13405 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rb1P13405 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.75□□□□□ -0.21
Rb1P13405 Gm27839-201ENSMUST00000184242 106 ntBASIC13.75□□□□□ -0.21
Rb1P13405 Mir6420-201ENSMUST00000185032 102 ntBASIC13.75□□□□□ -0.21
Rb1P13405 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Rb1P13405 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Rb1P13405 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rb1P13405 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
Rb1P13405 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rb1P13405 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rb1P13405 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rb1P13405 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rb1P13405 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rb1P13405 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Rb1P13405 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rb1P13405 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rb1P13405 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.74□□□□□ -0.21
Rb1P13405 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rb1P13405 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Rb1P13405 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Rb1P13405 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Rb1P13405 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rb1P13405 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.74□□□□□ -0.21
Rb1P13405 Gm12957-201ENSMUST00000117835 377 ntBASIC13.74□□□□□ -0.21
Rb1P13405 Snora78-201ENSMUST00000158630 128 ntBASIC13.74□□□□□ -0.21
Rb1P13405 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Rb1P13405 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.74□□□□□ -0.21
Rb1P13405 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rb1P13405 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rb1P13405 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rb1P13405 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rb1P13405 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.74□□□□□ -0.21
Rb1P13405 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rb1P13405 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rb1P13405 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rb1P13405 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Rb1P13405 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rb1P13405 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rb1P13405 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rb1P13405 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rb1P13405 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rb1P13405 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rb1P13405 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms