Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Gm13736-201ENSMUST00000119272 253 ntBASIC17.16■□□□□ 0.34
Nid2O88322 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC17.16■□□□□ 0.34
Nid2O88322 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC17.16■□□□□ 0.34
Nid2O88322 Ighv5-7-201ENSMUST00000192302 244 ntBASIC17.16■□□□□ 0.34
Nid2O88322 Gm8913-201ENSMUST00000209491 641 ntBASIC17.16■□□□□ 0.34
Nid2O88322 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nid2O88322 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC17.16■□□□□ 0.34
Nid2O88322 AC113031.8-201ENSMUST00000227856 631 ntBASIC17.16■□□□□ 0.34
Nid2O88322 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nid2O88322 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nid2O88322 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nid2O88322 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC17.16■□□□□ 0.34
Nid2O88322 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nid2O88322 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.16■□□□□ 0.34
Nid2O88322 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC17.16■□□□□ 0.34
Nid2O88322 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nid2O88322 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nid2O88322 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nid2O88322 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nid2O88322 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nid2O88322 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nid2O88322 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nid2O88322 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nid2O88322 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Nid2O88322 Gm12058-201ENSMUST00000118614 437 ntBASIC17.15■□□□□ 0.34
Nid2O88322 n-R5s14-201ENSMUST00000122688 107 ntBASIC17.15■□□□□ 0.34
Nid2O88322 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC17.15■□□□□ 0.34
Nid2O88322 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nid2O88322 Gm20426-201ENSMUST00000173657 440 ntBASIC17.15■□□□□ 0.34
Nid2O88322 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC17.15■□□□□ 0.34
Nid2O88322 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nid2O88322 Gm43416-201ENSMUST00000201916 1015 ntBASIC17.15■□□□□ 0.34
Nid2O88322 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC17.15■□□□□ 0.34
Nid2O88322 Gm18556-201ENSMUST00000219748 1031 ntBASIC17.15■□□□□ 0.34
Nid2O88322 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nid2O88322 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Nid2O88322 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nid2O88322 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nid2O88322 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nid2O88322 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nid2O88322 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nid2O88322 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.15■□□□□ 0.34
Nid2O88322 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nid2O88322 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nid2O88322 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nid2O88322 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nid2O88322 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nid2O88322 Gm7789-202ENSMUST00000211273 1400 ntBASIC17.15■□□□□ 0.34
Nid2O88322 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nid2O88322 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.15■□□□□ 0.34
Nid2O88322 Gm4864-201ENSMUST00000219894 1461 ntBASIC17.15■□□□□ 0.34
Nid2O88322 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nid2O88322 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.15■□□□□ 0.34
Nid2O88322 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Nid2O88322 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Nid2O88322 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC17.15■□□□□ 0.34
Nid2O88322 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nid2O88322 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Nid2O88322 Gm13996-201ENSMUST00000118456 430 ntBASIC17.14■□□□□ 0.33
Nid2O88322 Gm37201-201ENSMUST00000191845 523 ntBASIC17.14■□□□□ 0.33
Nid2O88322 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nid2O88322 Gm44100-201ENSMUST00000204329 436 ntBASIC17.14■□□□□ 0.33
Nid2O88322 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nid2O88322 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nid2O88322 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nid2O88322 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nid2O88322 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nid2O88322 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nid2O88322 AC126444.1-201ENSMUST00000225938 1768 ntBASIC17.14■□□□□ 0.33
Nid2O88322 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nid2O88322 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nid2O88322 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nid2O88322 Gm37133-201ENSMUST00000192705 1922 ntBASIC17.14■□□□□ 0.33
Nid2O88322 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nid2O88322 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nid2O88322 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nid2O88322 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nid2O88322 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nid2O88322 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nid2O88322 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nid2O88322 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nid2O88322 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nid2O88322 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nid2O88322 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nid2O88322 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nid2O88322 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Nid2O88322 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nid2O88322 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Nid2O88322 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC17.13■□□□□ 0.33
Nid2O88322 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nid2O88322 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nid2O88322 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Nid2O88322 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nid2O88322 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nid2O88322 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nid2O88322 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nid2O88322 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nid2O88322 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nid2O88322 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Nid2O88322 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms