Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.02□□□□□ -0.17
DffaO54786 Gm17330-201ENSMUST00000221047 165 ntBASIC14.02□□□□□ -0.17
DffaO54786 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffaO54786 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffaO54786 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffaO54786 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffaO54786 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
DffaO54786 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffaO54786 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
DffaO54786 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
DffaO54786 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffaO54786 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffaO54786 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffaO54786 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
DffaO54786 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffaO54786 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
DffaO54786 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.02□□□□□ -0.17
DffaO54786 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffaO54786 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.02□□□□□ -0.17
DffaO54786 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
DffaO54786 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
DffaO54786 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffaO54786 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.01□□□□□ -0.17
DffaO54786 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.01□□□□□ -0.17
DffaO54786 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.01□□□□□ -0.17
DffaO54786 Gm19078-201ENSMUST00000206311 727 ntBASIC14.01□□□□□ -0.17
DffaO54786 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.01□□□□□ -0.17
DffaO54786 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.01□□□□□ -0.17
DffaO54786 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
DffaO54786 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
DffaO54786 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.01□□□□□ -0.17
DffaO54786 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
DffaO54786 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
DffaO54786 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.01□□□□□ -0.17
DffaO54786 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
DffaO54786 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffaO54786 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
DffaO54786 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffaO54786 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffaO54786 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
DffaO54786 Gm13730-201ENSMUST00000121036 1462 ntBASIC14□□□□□ -0.17
DffaO54786 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffaO54786 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
DffaO54786 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14□□□□□ -0.17
DffaO54786 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
DffaO54786 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14□□□□□ -0.17
DffaO54786 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
DffaO54786 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14□□□□□ -0.17
DffaO54786 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14□□□□□ -0.17
DffaO54786 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
DffaO54786 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffaO54786 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
DffaO54786 Gm11524-201ENSMUST00000119349 807 ntBASIC14□□□□□ -0.17
DffaO54786 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
DffaO54786 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14□□□□□ -0.17
DffaO54786 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14□□□□□ -0.17
DffaO54786 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
DffaO54786 Gm26464-201ENSMUST00000157094 305 ntBASIC14□□□□□ -0.17
DffaO54786 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14□□□□□ -0.17
DffaO54786 Gm5161-201ENSMUST00000075243 853 ntBASIC14□□□□□ -0.17
DffaO54786 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffaO54786 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffaO54786 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffaO54786 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
DffaO54786 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14□□□□□ -0.17
DffaO54786 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffaO54786 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
DffaO54786 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
DffaO54786 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
DffaO54786 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffaO54786 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffaO54786 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
DffaO54786 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DffaO54786 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms