Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 TUBB3P1-201ENST00000405796 1332 ntBASIC16.57■□□□□ 0.24
KDELR3O43731 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KDELR3O43731 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
KDELR3O43731 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
KDELR3O43731 AL353705.2-201ENST00000428243 662 ntBASIC16.57■□□□□ 0.24
KDELR3O43731 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.57■□□□□ 0.24
KDELR3O43731 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.57■□□□□ 0.24
KDELR3O43731 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.57■□□□□ 0.24
KDELR3O43731 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.57■□□□□ 0.24
KDELR3O43731 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.57■□□□□ 0.24
KDELR3O43731 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KDELR3O43731 AC007967.4-201ENST00000614700 386 ntBASIC16.57■□□□□ 0.24
KDELR3O43731 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.57■□□□□ 0.24
KDELR3O43731 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KDELR3O43731 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KDELR3O43731 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KDELR3O43731 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
KDELR3O43731 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KDELR3O43731 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KDELR3O43731 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.57■□□□□ 0.24
KDELR3O43731 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
KDELR3O43731 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
KDELR3O43731 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.57■□□□□ 0.24
KDELR3O43731 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.56■□□□□ 0.24
KDELR3O43731 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
KDELR3O43731 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KDELR3O43731 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KDELR3O43731 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
KDELR3O43731 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
KDELR3O43731 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
KDELR3O43731 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KDELR3O43731 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KDELR3O43731 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.56■□□□□ 0.24
KDELR3O43731 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.56■□□□□ 0.24
KDELR3O43731 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
KDELR3O43731 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KDELR3O43731 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KDELR3O43731 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KDELR3O43731 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KDELR3O43731 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KDELR3O43731 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
KDELR3O43731 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.56■□□□□ 0.24
KDELR3O43731 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KDELR3O43731 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KDELR3O43731 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.56■□□□□ 0.24
KDELR3O43731 AC067863.1-201ENST00000494933 530 ntBASIC16.56■□□□□ 0.24
KDELR3O43731 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.56■□□□□ 0.24
KDELR3O43731 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.56■□□□□ 0.24
KDELR3O43731 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.56■□□□□ 0.24
KDELR3O43731 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.56■□□□□ 0.24
KDELR3O43731 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KDELR3O43731 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KDELR3O43731 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
KDELR3O43731 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KDELR3O43731 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KDELR3O43731 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
KDELR3O43731 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KDELR3O43731 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.56■□□□□ 0.24
KDELR3O43731 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.56■□□□□ 0.24
KDELR3O43731 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KDELR3O43731 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
KDELR3O43731 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.56■□□□□ 0.24
KDELR3O43731 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KDELR3O43731 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KDELR3O43731 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.55■□□□□ 0.24
KDELR3O43731 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.55■□□□□ 0.24
KDELR3O43731 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDELR3O43731 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.55■□□□□ 0.24
KDELR3O43731 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
KDELR3O43731 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDELR3O43731 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDELR3O43731 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDELR3O43731 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
KDELR3O43731 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.55■□□□□ 0.24
KDELR3O43731 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDELR3O43731 AC079328.2-201ENST00000561241 3354 ntBASIC16.55■□□□□ 0.24
KDELR3O43731 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.55■□□□□ 0.24
KDELR3O43731 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDELR3O43731 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.55■□□□□ 0.24
KDELR3O43731 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.55■□□□□ 0.24
KDELR3O43731 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.55■□□□□ 0.24
KDELR3O43731 FAM86GP-201ENST00000448322 971 ntBASIC16.55■□□□□ 0.24
KDELR3O43731 AC245100.5-201ENST00000452108 331 ntBASIC16.55■□□□□ 0.24
KDELR3O43731 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.55■□□□□ 0.24
KDELR3O43731 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.55■□□□□ 0.24
KDELR3O43731 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.55■□□□□ 0.24
KDELR3O43731 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KDELR3O43731 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.55■□□□□ 0.24
KDELR3O43731 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.55■□□□□ 0.24
KDELR3O43731 AC051619.7-201ENST00000568314 623 ntBASIC16.55■□□□□ 0.24
KDELR3O43731 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.55■□□□□ 0.24
KDELR3O43731 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
KDELR3O43731 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.55■□□□□ 0.24
KDELR3O43731 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDELR3O43731 AC099398.1-201ENST00000567919 2776 ntBASIC16.55■□□□□ 0.24
KDELR3O43731 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDELR3O43731 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDELR3O43731 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDELR3O43731 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
KDELR3O43731 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms