Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Tubgcp6G5E8P0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tubgcp6G5E8P0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Tubgcp6G5E8P0 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tubgcp6G5E8P0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Gm12380-201ENSMUST00000119012 544 ntBASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 AC126444.1-201ENSMUST00000225938 1768 ntBASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Gm13611-201ENSMUST00000118269 318 ntBASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Gm5070-201ENSMUST00000177599 862 ntBASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp6G5E8P0 Gm3287-205ENSMUST00000228893 1332 ntBASIC18.16■□□□□ 0.5
Tubgcp6G5E8P0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Tubgcp6G5E8P0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Tubgcp6G5E8P0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
Tubgcp6G5E8P0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubgcp6G5E8P0 Gm44999-201ENSMUST00000207456 1493 ntBASIC18.16■□□□□ 0.5
Tubgcp6G5E8P0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC18.16■□□□□ 0.5
Tubgcp6G5E8P0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubgcp6G5E8P0 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tubgcp6G5E8P0 Gm17208-201ENSMUST00000168388 535 ntBASIC18.16■□□□□ 0.5
Tubgcp6G5E8P0 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tubgcp6G5E8P0 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC18.16■□□□□ 0.5
Tubgcp6G5E8P0 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tubgcp6G5E8P0 AC154849.4-201ENSMUST00000224868 365 ntBASIC18.16■□□□□ 0.5
Tubgcp6G5E8P0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubgcp6G5E8P0 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubgcp6G5E8P0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tubgcp6G5E8P0 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubgcp6G5E8P0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC18.16■□□□□ 0.5
Tubgcp6G5E8P0 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubgcp6G5E8P0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp6G5E8P0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp6G5E8P0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
Tubgcp6G5E8P0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp6G5E8P0 Gm17391-201ENSMUST00000171036 126 ntBASIC18.15■□□□□ 0.5
Tubgcp6G5E8P0 Mir7221-201ENSMUST00000184009 72 ntBASIC18.15■□□□□ 0.5
Tubgcp6G5E8P0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC18.15■□□□□ 0.5
Tubgcp6G5E8P0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp6G5E8P0 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Tubgcp6G5E8P0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp6G5E8P0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp6G5E8P0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp6G5E8P0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.15■□□□□ 0.5
Tubgcp6G5E8P0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp6G5E8P0 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp6G5E8P0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Tubgcp6G5E8P0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp6G5E8P0 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp6G5E8P0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp6G5E8P0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Tubgcp6G5E8P0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tubgcp6G5E8P0 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tubgcp6G5E8P0 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC18.14■□□□□ 0.5
Tubgcp6G5E8P0 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Tubgcp6G5E8P0 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tubgcp6G5E8P0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tubgcp6G5E8P0 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Tubgcp6G5E8P0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC18.14■□□□□ 0.49
Tubgcp6G5E8P0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.14■□□□□ 0.49
Tubgcp6G5E8P0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tubgcp6G5E8P0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC18.14■□□□□ 0.49
Tubgcp6G5E8P0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tubgcp6G5E8P0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tubgcp6G5E8P0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tubgcp6G5E8P0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tubgcp6G5E8P0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tubgcp6G5E8P0 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tubgcp6G5E8P0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.14■□□□□ 0.49
Tubgcp6G5E8P0 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tubgcp6G5E8P0 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tubgcp6G5E8P0 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tubgcp6G5E8P0 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC18.14■□□□□ 0.49
Tubgcp6G5E8P0 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC18.14■□□□□ 0.49
Tubgcp6G5E8P0 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Tubgcp6G5E8P0 AC166051.1-201ENSMUST00000214313 210 ntBASIC18.14■□□□□ 0.49
Tubgcp6G5E8P0 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms