Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.64□□□□□ -0.39
SrfQ9JM73 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Gm14726-201ENSMUST00000120623 896 ntBASIC12.64□□□□□ -0.39
SrfQ9JM73 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.64□□□□□ -0.39
SrfQ9JM73 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.64□□□□□ -0.39
SrfQ9JM73 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SrfQ9JM73 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SrfQ9JM73 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.64□□□□□ -0.39
SrfQ9JM73 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.64□□□□□ -0.39
SrfQ9JM73 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SrfQ9JM73 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SrfQ9JM73 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SrfQ9JM73 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SrfQ9JM73 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SrfQ9JM73 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SrfQ9JM73 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.63□□□□□ -0.39
SrfQ9JM73 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SrfQ9JM73 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SrfQ9JM73 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SrfQ9JM73 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SrfQ9JM73 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SrfQ9JM73 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SrfQ9JM73 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SrfQ9JM73 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SrfQ9JM73 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SrfQ9JM73 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.63□□□□□ -0.39
SrfQ9JM73 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.63□□□□□ -0.39
SrfQ9JM73 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SrfQ9JM73 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC12.63□□□□□ -0.39
SrfQ9JM73 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.63□□□□□ -0.39
SrfQ9JM73 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.63□□□□□ -0.39
SrfQ9JM73 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SrfQ9JM73 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.63□□□□□ -0.39
SrfQ9JM73 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SrfQ9JM73 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.63□□□□□ -0.39
SrfQ9JM73 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.63□□□□□ -0.39
SrfQ9JM73 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SrfQ9JM73 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SrfQ9JM73 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SrfQ9JM73 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SrfQ9JM73 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SrfQ9JM73 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SrfQ9JM73 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SrfQ9JM73 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.63□□□□□ -0.39
SrfQ9JM73 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SrfQ9JM73 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SrfQ9JM73 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SrfQ9JM73 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SrfQ9JM73 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SrfQ9JM73 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SrfQ9JM73 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SrfQ9JM73 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SrfQ9JM73 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SrfQ9JM73 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SrfQ9JM73 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SrfQ9JM73 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SrfQ9JM73 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SrfQ9JM73 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SrfQ9JM73 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.62□□□□□ -0.39
SrfQ9JM73 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SrfQ9JM73 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SrfQ9JM73 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SrfQ9JM73 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SrfQ9JM73 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SrfQ9JM73 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SrfQ9JM73 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SrfQ9JM73 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SrfQ9JM73 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SrfQ9JM73 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SrfQ9JM73 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SrfQ9JM73 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SrfQ9JM73 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SrfQ9JM73 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SrfQ9JM73 Gm12997-201ENSMUST00000120207 640 ntBASIC12.62□□□□□ -0.39
SrfQ9JM73 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC12.62□□□□□ -0.39
SrfQ9JM73 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SrfQ9JM73 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.62□□□□□ -0.39
SrfQ9JM73 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.62□□□□□ -0.39
SrfQ9JM73 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms