Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Rubie-203ENSMUST00000227803 2430 ntBASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Gm6018-201ENSMUST00000216090 1306 ntBASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Gm13015-201ENSMUST00000118674 204 ntBASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Gm9727-201ENSMUST00000161387 555 ntBASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 AC124751.1-201ENSMUST00000222716 1408 ntBASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hdhd3Q9CYW4 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Mir698-201ENSMUST00000102164 109 ntBASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Gm12260-201ENSMUST00000122447 411 ntBASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Gm18934-201ENSMUST00000216671 1044 ntBASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC10.87□□□□□ -0.67
Hdhd3Q9CYW4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms