Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msh4Q99MT2 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msh4Q99MT2 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.08□□□□□ -0.32
Msh4Q99MT2 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.07□□□□□ -0.32
Msh4Q99MT2 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Gm29741-201ENSMUST00000192667 421 ntBASIC13.07□□□□□ -0.32
Msh4Q99MT2 Gm18018-201ENSMUST00000198273 408 ntBASIC13.07□□□□□ -0.32
Msh4Q99MT2 Gm9794-201ENSMUST00000202370 423 ntBASIC13.07□□□□□ -0.32
Msh4Q99MT2 Gm45668-201ENSMUST00000211271 493 ntBASIC13.07□□□□□ -0.32
Msh4Q99MT2 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.07□□□□□ -0.32
Msh4Q99MT2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh4Q99MT2 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.06□□□□□ -0.32
Msh4Q99MT2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.06□□□□□ -0.32
Msh4Q99MT2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Gm6745-201ENSMUST00000199216 526 ntBASIC13.06□□□□□ -0.32
Msh4Q99MT2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.06□□□□□ -0.32
Msh4Q99MT2 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.06□□□□□ -0.32
Msh4Q99MT2 Gm6180-201ENSMUST00000065243 498 ntBASIC13.06□□□□□ -0.32
Msh4Q99MT2 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.06□□□□□ -0.32
Msh4Q99MT2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msh4Q99MT2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Msh4Q99MT2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msh4Q99MT2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Msh4Q99MT2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msh4Q99MT2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msh4Q99MT2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Msh4Q99MT2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msh4Q99MT2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms