Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Gm12341-201ENSMUST00000119724 503 ntBASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Gm9002-201ENSMUST00000178437 499 ntBASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Gm6266-201ENSMUST00000203844 806 ntBASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tlr3Q99MB1 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Gm15678-201ENSMUST00000117573 960 ntBASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Gm42550-201ENSMUST00000201553 960 ntBASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tlr3Q99MB1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tlr3Q99MB1 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.37□□□□□ -0.11
Tlr3Q99MB1 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms