Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Gm3890-201ENSMUST00000182416 207 ntBASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Mir6979-201ENSMUST00000183927 56 ntBASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 AC073947.1-201ENSMUST00000216991 649 ntBASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx6-1Q99MA9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Gm24990-201ENSMUST00000157406 323 ntBASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Morn2-202ENSMUST00000227729 656 ntBASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms