Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Grk6-205ENSMUST00000224653 2976 ntBASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Gm27701-201ENSMUST00000184498 110 ntBASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Gm2495-201ENSMUST00000191160 466 ntBASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Gm9908-201ENSMUST00000211534 448 ntBASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn1Q8K0T0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Gm44397-201ENSMUST00000195950 113 ntBASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 AC153961.1-201ENSMUST00000217760 385 ntBASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn1Q8K0T0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 Gm45251-201ENSMUST00000209486 1465 ntBASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 Gm28911-201ENSMUST00000188837 117 ntBASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 Gm45384-201ENSMUST00000210451 277 ntBASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms