Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Gm24990-201ENSMUST00000157406 323 ntBASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Gm8584-201ENSMUST00000171982 758 ntBASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Col6a6Q8C6K9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Gm43947-201ENSMUST00000203019 959 ntBASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Gm25732-201ENSMUST00000175168 60 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms