Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Gm11424-201ENSMUST00000121929 829 ntBASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 AC125117.1-201ENSMUST00000228121 468 ntBASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Gm37691-201ENSMUST00000192147 2573 ntBASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc60Q8C4J0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc60Q8C4J0 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc60Q8C4J0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC17.08■□□□□ 0.33
Ccdc60Q8C4J0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc60Q8C4J0 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc60Q8C4J0 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc60Q8C4J0 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC17.08■□□□□ 0.32
Ccdc60Q8C4J0 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc60Q8C4J0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc60Q8C4J0 Gm12960-201ENSMUST00000120017 1066 ntBASIC17.08■□□□□ 0.32
Ccdc60Q8C4J0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Ccdc60Q8C4J0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC17.08■□□□□ 0.32
Ccdc60Q8C4J0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC17.08■□□□□ 0.32
Ccdc60Q8C4J0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ccdc60Q8C4J0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc60Q8C4J0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc60Q8C4J0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc60Q8C4J0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc60Q8C4J0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC17.08■□□□□ 0.32
Ccdc60Q8C4J0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc60Q8C4J0 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc60Q8C4J0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc60Q8C4J0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc60Q8C4J0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc60Q8C4J0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC17.07■□□□□ 0.32
Ccdc60Q8C4J0 Gm14371-201ENSMUST00000138925 1518 ntBASIC17.07■□□□□ 0.32
Ccdc60Q8C4J0 Gm44065-201ENSMUST00000203184 3527 ntBASIC17.07■□□□□ 0.32
Ccdc60Q8C4J0 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc60Q8C4J0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc60Q8C4J0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Ccdc60Q8C4J0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc60Q8C4J0 Gm45242-201ENSMUST00000210666 2129 ntBASIC17.07■□□□□ 0.32
Ccdc60Q8C4J0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc60Q8C4J0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc60Q8C4J0 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc60Q8C4J0 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc60Q8C4J0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
Ccdc60Q8C4J0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc60Q8C4J0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc60Q8C4J0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc60Q8C4J0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc60Q8C4J0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc60Q8C4J0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc60Q8C4J0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc60Q8C4J0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms