Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Depdc1bQ8BH88 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Depdc1bQ8BH88 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.58□□□□□ -0.07
Depdc1bQ8BH88 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Depdc1bQ8BH88 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Depdc1bQ8BH88 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Gm15770-201ENSMUST00000117498 584 ntBASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Gm11918-201ENSMUST00000121660 179 ntBASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Gm43438-201ENSMUST00000198133 379 ntBASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Depdc1bQ8BH88 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Gm17795-201ENSMUST00000214505 757 ntBASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms