Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VclQ64727 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.18□□□□□ -0.3
VclQ64727 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VclQ64727 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
VclQ64727 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VclQ64727 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.18□□□□□ -0.3
VclQ64727 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VclQ64727 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VclQ64727 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
VclQ64727 Gm12928-201ENSMUST00000117115 573 ntBASIC13.18□□□□□ -0.3
VclQ64727 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.18□□□□□ -0.3
VclQ64727 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VclQ64727 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.18□□□□□ -0.3
VclQ64727 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.18□□□□□ -0.3
VclQ64727 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VclQ64727 Gm5186-201ENSMUST00000218781 920 ntBASIC13.18□□□□□ -0.3
VclQ64727 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.18□□□□□ -0.3
VclQ64727 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VclQ64727 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VclQ64727 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.18□□□□□ -0.3
VclQ64727 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
VclQ64727 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VclQ64727 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VclQ64727 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VclQ64727 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VclQ64727 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.18□□□□□ -0.3
VclQ64727 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VclQ64727 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
VclQ64727 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
VclQ64727 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VclQ64727 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.17□□□□□ -0.3
VclQ64727 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
VclQ64727 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.17□□□□□ -0.3
VclQ64727 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
VclQ64727 Gm27892-201ENSMUST00000185017 106 ntBASIC13.17□□□□□ -0.3
VclQ64727 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.17□□□□□ -0.3
VclQ64727 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.17□□□□□ -0.3
VclQ64727 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Acot6-202ENSMUST00000222921 3622 ntBASIC13.17□□□□□ -0.3
VclQ64727 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
VclQ64727 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.17□□□□□ -0.3
VclQ64727 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
VclQ64727 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VclQ64727 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.16□□□□□ -0.3
VclQ64727 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
VclQ64727 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.16□□□□□ -0.3
VclQ64727 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.16□□□□□ -0.3
VclQ64727 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.16□□□□□ -0.3
VclQ64727 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
VclQ64727 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Mir1894-201ENSMUST00000122802 81 ntBASIC13.16□□□□□ -0.3
VclQ64727 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.16□□□□□ -0.3
VclQ64727 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.16□□□□□ -0.3
VclQ64727 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
VclQ64727 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Gm2495-201ENSMUST00000191160 466 ntBASIC13.16□□□□□ -0.3
VclQ64727 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.16□□□□□ -0.3
VclQ64727 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
VclQ64727 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms