Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 Gm16202-201ENSMUST00000117532 544 ntBASIC14.49□□□□□ -0.09
Col9a2Q07643 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.49□□□□□ -0.09
Col9a2Q07643 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.49□□□□□ -0.09
Col9a2Q07643 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.49□□□□□ -0.09
Col9a2Q07643 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Col9a2Q07643 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.49□□□□□ -0.09
Col9a2Q07643 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.49□□□□□ -0.09
Col9a2Q07643 Gm37008-201ENSMUST00000195712 319 ntBASIC14.49□□□□□ -0.09
Col9a2Q07643 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Col9a2Q07643 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col9a2Q07643 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Col9a2Q07643 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col9a2Q07643 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Col9a2Q07643 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Col9a2Q07643 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Col9a2Q07643 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Col9a2Q07643 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Col9a2Q07643 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Col9a2Q07643 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.48□□□□□ -0.09
Col9a2Q07643 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.48□□□□□ -0.09
Col9a2Q07643 Gm11978-201ENSMUST00000122315 466 ntBASIC14.48□□□□□ -0.09
Col9a2Q07643 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.48□□□□□ -0.09
Col9a2Q07643 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.48□□□□□ -0.09
Col9a2Q07643 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.48□□□□□ -0.09
Col9a2Q07643 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.48□□□□□ -0.09
Col9a2Q07643 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.48□□□□□ -0.09
Col9a2Q07643 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.48□□□□□ -0.09
Col9a2Q07643 Gm43118-201ENSMUST00000199149 775 ntBASIC14.48□□□□□ -0.09
Col9a2Q07643 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.48□□□□□ -0.09
Col9a2Q07643 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.48□□□□□ -0.09
Col9a2Q07643 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.48□□□□□ -0.09
Col9a2Q07643 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.48□□□□□ -0.09
Col9a2Q07643 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.48□□□□□ -0.09
Col9a2Q07643 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Gm7399-201ENSMUST00000032395 858 ntBASIC14.48□□□□□ -0.09
Col9a2Q07643 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Col9a2Q07643 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Col9a2Q07643 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Col9a2Q07643 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a2Q07643 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Col9a2Q07643 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Col9a2Q07643 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Col9a2Q07643 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms