Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Mir874-201ENSMUST00000104769 76 ntBASIC11.62□□□□□ -0.55
Atf1P81269 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.62□□□□□ -0.55
Atf1P81269 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 Gm9522-201ENSMUST00000182394 926 ntBASIC11.62□□□□□ -0.55
Atf1P81269 Gm27989-201ENSMUST00000184721 107 ntBASIC11.62□□□□□ -0.55
Atf1P81269 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.62□□□□□ -0.55
Atf1P81269 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Atf1P81269 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.62□□□□□ -0.55
Atf1P81269 Gm17330-201ENSMUST00000221047 165 ntBASIC11.62□□□□□ -0.55
Atf1P81269 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.62□□□□□ -0.55
Atf1P81269 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Atf1P81269 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.62□□□□□ -0.55
Atf1P81269 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.62□□□□□ -0.55
Atf1P81269 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.62□□□□□ -0.55
Atf1P81269 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Atf1P81269 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf1P81269 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf1P81269 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf1P81269 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf1P81269 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf1P81269 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf1P81269 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf1P81269 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf1P81269 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Atf1P81269 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf1P81269 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Atf1P81269 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Atf1P81269 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.61□□□□□ -0.55
Atf1P81269 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atf1P81269 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Atf1P81269 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.61□□□□□ -0.55
Atf1P81269 Mir6956-201ENSMUST00000183598 62 ntBASIC11.61□□□□□ -0.55
Atf1P81269 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf1P81269 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Atf1P81269 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf1P81269 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atf1P81269 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf1P81269 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf1P81269 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf1P81269 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf1P81269 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.61□□□□□ -0.55
Atf1P81269 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.61□□□□□ -0.55
Atf1P81269 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.61□□□□□ -0.55
Atf1P81269 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atf1P81269 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf1P81269 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.61□□□□□ -0.55
Atf1P81269 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf1P81269 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atf1P81269 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.6□□□□□ -0.55
Atf1P81269 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Atf1P81269 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Atf1P81269 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.6□□□□□ -0.55
Atf1P81269 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.6□□□□□ -0.55
Atf1P81269 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.6□□□□□ -0.55
Atf1P81269 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Atf1P81269 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.6□□□□□ -0.55
Atf1P81269 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.6□□□□□ -0.55
Atf1P81269 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Atf1P81269 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Atf1P81269 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms