Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ybx1P62960 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ybx1P62960 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ybx1P62960 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ybx1P62960 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ybx1P62960 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ybx1P62960 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ybx1P62960 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.71□□□□□ -0.21
Ybx1P62960 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Ybx1P62960 Grk6-205ENSMUST00000224653 2976 ntBASIC13.71□□□□□ -0.21
Ybx1P62960 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ybx1P62960 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ybx1P62960 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ybx1P62960 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ybx1P62960 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ybx1P62960 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
Ybx1P62960 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.71□□□□□ -0.21
Ybx1P62960 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ybx1P62960 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ybx1P62960 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ybx1P62960 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ybx1P62960 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.71□□□□□ -0.21
Ybx1P62960 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ybx1P62960 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.71□□□□□ -0.21
Ybx1P62960 Gm42627-201ENSMUST00000197347 224 ntBASIC13.71□□□□□ -0.21
Ybx1P62960 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.71□□□□□ -0.21
Ybx1P62960 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ybx1P62960 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ybx1P62960 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ybx1P62960 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ybx1P62960 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.71□□□□□ -0.21
Ybx1P62960 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ybx1P62960 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ybx1P62960 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ybx1P62960 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ybx1P62960 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.71□□□□□ -0.22
Ybx1P62960 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.71□□□□□ -0.22
Ybx1P62960 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ybx1P62960 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ybx1P62960 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.71□□□□□ -0.22
Ybx1P62960 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ybx1P62960 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.7□□□□□ -0.22
Ybx1P62960 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ybx1P62960 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ybx1P62960 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ybx1P62960 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ybx1P62960 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Gm8805-201ENSMUST00000117848 313 ntBASIC13.7□□□□□ -0.22
Ybx1P62960 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.7□□□□□ -0.22
Ybx1P62960 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.7□□□□□ -0.22
Ybx1P62960 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.7□□□□□ -0.22
Ybx1P62960 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.7□□□□□ -0.22
Ybx1P62960 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.7□□□□□ -0.22
Ybx1P62960 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.7□□□□□ -0.22
Ybx1P62960 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.7□□□□□ -0.22
Ybx1P62960 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.7□□□□□ -0.22
Ybx1P62960 Gm45865-201ENSMUST00000211815 945 ntBASIC13.7□□□□□ -0.22
Ybx1P62960 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.7□□□□□ -0.22
Ybx1P62960 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ybx1P62960 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.7□□□□□ -0.22
Ybx1P62960 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
Ybx1P62960 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.7□□□□□ -0.22
Ybx1P62960 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ybx1P62960 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ybx1P62960 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ybx1P62960 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.69□□□□□ -0.22
Ybx1P62960 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.69□□□□□ -0.22
Ybx1P62960 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.69□□□□□ -0.22
Ybx1P62960 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms