Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.64□□□□□ -0.23
Sox1P53783 Gm12502-201ENSMUST00000120197 444 ntBASIC13.64□□□□□ -0.23
Sox1P53783 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox1P53783 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.64□□□□□ -0.23
Sox1P53783 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox1P53783 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.64□□□□□ -0.23
Sox1P53783 Arhgef33-207ENSMUST00000224966 490 ntBASIC13.64□□□□□ -0.23
Sox1P53783 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox1P53783 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.64□□□□□ -0.23
Sox1P53783 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox1P53783 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox1P53783 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox1P53783 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.64□□□□□ -0.23
Sox1P53783 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sox1P53783 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox1P53783 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.64□□□□□ -0.23
Sox1P53783 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Sox1P53783 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.64□□□□□ -0.23
Sox1P53783 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox1P53783 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox1P53783 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox1P53783 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.63□□□□□ -0.23
Sox1P53783 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox1P53783 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox1P53783 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Sox1P53783 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox1P53783 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox1P53783 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox1P53783 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox1P53783 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox1P53783 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox1P53783 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.63□□□□□ -0.23
Sox1P53783 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox1P53783 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.63□□□□□ -0.23
Sox1P53783 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.63□□□□□ -0.23
Sox1P53783 Gm8913-201ENSMUST00000209491 641 ntBASIC13.63□□□□□ -0.23
Sox1P53783 AC073947.1-201ENSMUST00000216991 649 ntBASIC13.63□□□□□ -0.23
Sox1P53783 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.63□□□□□ -0.23
Sox1P53783 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox1P53783 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox1P53783 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.63□□□□□ -0.23
Sox1P53783 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sox1P53783 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox1P53783 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox1P53783 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox1P53783 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sox1P53783 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox1P53783 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox1P53783 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sox1P53783 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox1P53783 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.62□□□□□ -0.23
Sox1P53783 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox1P53783 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.62□□□□□ -0.23
Sox1P53783 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox1P53783 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox1P53783 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox1P53783 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Sox1P53783 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Sox1P53783 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox1P53783 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Sox1P53783 Gm16202-201ENSMUST00000117532 544 ntBASIC13.62□□□□□ -0.23
Sox1P53783 Gm12029-201ENSMUST00000120073 832 ntBASIC13.62□□□□□ -0.23
Sox1P53783 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.62□□□□□ -0.23
Sox1P53783 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.62□□□□□ -0.23
Sox1P53783 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox1P53783 Gm17889-201ENSMUST00000198410 598 ntBASIC13.62□□□□□ -0.23
Sox1P53783 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sox1P53783 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.62□□□□□ -0.23
Sox1P53783 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.62□□□□□ -0.23
Sox1P53783 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Sox1P53783 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.62□□□□□ -0.23
Sox1P53783 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.62□□□□□ -0.23
Sox1P53783 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox1P53783 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox1P53783 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sox1P53783 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox1P53783 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox1P53783 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox1P53783 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox1P53783 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox1P53783 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox1P53783 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox1P53783 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox1P53783 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.62□□□□□ -0.23
Sox1P53783 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox1P53783 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.62□□□□□ -0.23
Sox1P53783 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox1P53783 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Sox1P53783 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sox1P53783 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Sox1P53783 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms