Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
IghmP01872 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.57□□□□□ -0.4
IghmP01872 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
IghmP01872 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
IghmP01872 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
IghmP01872 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
IghmP01872 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
IghmP01872 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
IghmP01872 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
IghmP01872 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.57□□□□□ -0.4
IghmP01872 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.57□□□□□ -0.4
IghmP01872 Gm15376-201ENSMUST00000122258 783 ntBASIC12.57□□□□□ -0.4
IghmP01872 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.57□□□□□ -0.4
IghmP01872 Gm43094-201ENSMUST00000196549 921 ntBASIC12.57□□□□□ -0.4
IghmP01872 Gm5279-201ENSMUST00000199575 745 ntBASIC12.57□□□□□ -0.4
IghmP01872 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
IghmP01872 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
IghmP01872 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
IghmP01872 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
IghmP01872 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.57□□□□□ -0.4
IghmP01872 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
IghmP01872 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
IghmP01872 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
IghmP01872 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
IghmP01872 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.56□□□□□ -0.4
IghmP01872 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.56□□□□□ -0.4
IghmP01872 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Mir6956-201ENSMUST00000183598 62 ntBASIC12.56□□□□□ -0.4
IghmP01872 Gm27989-201ENSMUST00000184721 107 ntBASIC12.56□□□□□ -0.4
IghmP01872 Gm27838-201ENSMUST00000184829 128 ntBASIC12.56□□□□□ -0.4
IghmP01872 Gm38144-201ENSMUST00000192790 465 ntBASIC12.56□□□□□ -0.4
IghmP01872 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.56□□□□□ -0.4
IghmP01872 Gm19078-201ENSMUST00000206311 727 ntBASIC12.56□□□□□ -0.4
IghmP01872 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.56□□□□□ -0.4
IghmP01872 Gm20445-201ENSMUST00000061905 565 ntBASIC12.56□□□□□ -0.4
IghmP01872 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.56□□□□□ -0.4
IghmP01872 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.56□□□□□ -0.4
IghmP01872 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
IghmP01872 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
IghmP01872 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
IghmP01872 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
IghmP01872 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
IghmP01872 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
IghmP01872 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
IghmP01872 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
IghmP01872 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.55□□□□□ -0.4
IghmP01872 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
IghmP01872 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
IghmP01872 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 Gm11524-201ENSMUST00000119349 807 ntBASIC12.55□□□□□ -0.4
IghmP01872 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.55□□□□□ -0.4
IghmP01872 Mir7684-201ENSMUST00000183858 60 ntBASIC12.55□□□□□ -0.4
IghmP01872 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.55□□□□□ -0.4
IghmP01872 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.55□□□□□ -0.4
IghmP01872 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 Gm9797-201ENSMUST00000052902 613 ntBASIC12.55□□□□□ -0.4
IghmP01872 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.55□□□□□ -0.4
IghmP01872 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
IghmP01872 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
IghmP01872 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
IghmP01872 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms