Protein–RNA interactions for Protein: P01727

Ig lambda-1 chain V region S43, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01727 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01727 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.71□□□□□ -0.69
P01727 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01727 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.71□□□□□ -0.69
P01727 Zkscan14-203ENSMUST00000198959 2243 ntBASIC10.71□□□□□ -0.69
P01727 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.71□□□□□ -0.69
P01727 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.71□□□□□ -0.69
P01727 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01727 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.71□□□□□ -0.69
P01727 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01727 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01727 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01727 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01727 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01727 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01727 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01727 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01727 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01727 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01727 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01727 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01727 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01727 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01727 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01727 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
P01727 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.7
P01727 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
P01727 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
P01727 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
P01727 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
P01727 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
P01727 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Gm43399-201ENSMUST00000202546 2374 ntBASIC10.7□□□□□ -0.7
P01727 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
P01727 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
P01727 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.7□□□□□ -0.7
P01727 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.7□□□□□ -0.7
P01727 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.7□□□□□ -0.7
P01727 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.7□□□□□ -0.7
P01727 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.7□□□□□ -0.7
P01727 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.7□□□□□ -0.7
P01727 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.7□□□□□ -0.7
P01727 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.7□□□□□ -0.7
P01727 Gm42693-201ENSMUST00000196779 631 ntBASIC10.7□□□□□ -0.7
P01727 Gm45331-201ENSMUST00000209868 554 ntBASIC10.7□□□□□ -0.7
P01727 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.7□□□□□ -0.7
P01727 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.7□□□□□ -0.7
P01727 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.7□□□□□ -0.7
P01727 Gm29705-201ENSMUST00000212598 474 ntBASIC10.7□□□□□ -0.7
P01727 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.7□□□□□ -0.7
P01727 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Gm45546-201ENSMUST00000211053 2394 ntBASIC10.7□□□□□ -0.7
P01727 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
P01727 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
P01727 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
P01727 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
P01727 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01727 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01727 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01727 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.69□□□□□ -0.7
P01727 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01727 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms