Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Gm38671-201ENSMUST00000200573 130 ntBASIC16.33■□□□□ 0.2
Mmp8O70138 Gm10012-201ENSMUST00000078252 192 ntBASIC16.33■□□□□ 0.2
Mmp8O70138 Gm5356-201ENSMUST00000093326 615 ntBASIC16.33■□□□□ 0.2
Mmp8O70138 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp8O70138 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp8O70138 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp8O70138 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp8O70138 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp8O70138 Gm15459-201ENSMUST00000117405 1941 ntBASIC16.33■□□□□ 0.2
Mmp8O70138 Gm8355-201ENSMUST00000177767 1941 ntBASIC16.33■□□□□ 0.2
Mmp8O70138 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp8O70138 AC122314.1-201ENSMUST00000223056 2239 ntBASIC16.33■□□□□ 0.2
Mmp8O70138 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp8O70138 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp8O70138 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp8O70138 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp8O70138 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp8O70138 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp8O70138 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Mmp8O70138 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp8O70138 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp8O70138 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp8O70138 Gm15544-201ENSMUST00000118776 1531 ntBASIC16.32■□□□□ 0.2
Mmp8O70138 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.32■□□□□ 0.2
Mmp8O70138 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp8O70138 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp8O70138 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp8O70138 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.32■□□□□ 0.2
Mmp8O70138 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Mmp8O70138 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp8O70138 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Mmp8O70138 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC16.32■□□□□ 0.2
Mmp8O70138 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Mmp8O70138 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp8O70138 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp8O70138 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp8O70138 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp8O70138 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp8O70138 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp8O70138 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC16.31■□□□□ 0.2
Mmp8O70138 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp8O70138 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp8O70138 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp8O70138 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Mmp8O70138 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp8O70138 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp8O70138 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp8O70138 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp8O70138 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp8O70138 Gm11978-201ENSMUST00000122315 466 ntBASIC16.31■□□□□ 0.2
Mmp8O70138 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp8O70138 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp8O70138 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Mmp8O70138 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.31■□□□□ 0.2
Mmp8O70138 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Mmp8O70138 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC16.31■□□□□ 0.2
Mmp8O70138 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC16.31■□□□□ 0.2
Mmp8O70138 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC16.31■□□□□ 0.2
Mmp8O70138 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC16.31■□□□□ 0.2
Mmp8O70138 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC16.31■□□□□ 0.2
Mmp8O70138 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp8O70138 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp8O70138 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.31■□□□□ 0.2
Mmp8O70138 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp8O70138 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Mmp8O70138 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.31■□□□□ 0.2
Mmp8O70138 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.31■□□□□ 0.2
Mmp8O70138 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Mmp8O70138 AC238940.1-201ENSMUST00000225106 1858 ntBASIC16.31■□□□□ 0.2
Mmp8O70138 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Mmp8O70138 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Mmp8O70138 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC16.3■□□□□ 0.2
Mmp8O70138 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp8O70138 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp8O70138 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Mmp8O70138 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp8O70138 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.3■□□□□ 0.2
Mmp8O70138 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp8O70138 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp8O70138 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.3■□□□□ 0.2
Mmp8O70138 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp8O70138 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp8O70138 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp8O70138 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp8O70138 Gm11803-201ENSMUST00000119966 444 ntBASIC16.3■□□□□ 0.2
Mmp8O70138 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp8O70138 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp8O70138 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp8O70138 AC122305.4-201ENSMUST00000216159 1206 ntBASIC16.3■□□□□ 0.2
Mmp8O70138 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp8O70138 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Mmp8O70138 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Mmp8O70138 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp8O70138 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Mmp8O70138 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp8O70138 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Mmp8O70138 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp8O70138 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.3■□□□□ 0.2
Mmp8O70138 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp8O70138 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms