Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Pde6dO55057 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Pde6dO55057 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.56□□□□□ -0.72
Pde6dO55057 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC10.56□□□□□ -0.72
Pde6dO55057 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC10.56□□□□□ -0.72
Pde6dO55057 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Thap2-203ENSMUST00000218989 527 ntBASIC10.56□□□□□ -0.72
Pde6dO55057 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Pde6dO55057 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Pde6dO55057 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.56□□□□□ -0.72
Pde6dO55057 AC114543.1-201ENSMUST00000226451 1558 ntBASIC10.56□□□□□ -0.72
Pde6dO55057 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Pde6dO55057 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Pde6dO55057 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pde6dO55057 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC10.55□□□□□ -0.72
Pde6dO55057 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.55□□□□□ -0.72
Pde6dO55057 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.55□□□□□ -0.72
Pde6dO55057 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
Pde6dO55057 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Mir698-201ENSMUST00000102164 109 ntBASIC10.55□□□□□ -0.72
Pde6dO55057 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC10.55□□□□□ -0.72
Pde6dO55057 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC10.55□□□□□ -0.72
Pde6dO55057 Gm15483-201ENSMUST00000120338 456 ntBASIC10.55□□□□□ -0.72
Pde6dO55057 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC10.55□□□□□ -0.72
Pde6dO55057 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Mir6982-201ENSMUST00000184354 68 ntBASIC10.55□□□□□ -0.72
Pde6dO55057 Mir7036b-201ENSMUST00000184791 63 ntBASIC10.55□□□□□ -0.72
Pde6dO55057 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC10.55□□□□□ -0.72
Pde6dO55057 AA619741-201ENSMUST00000195095 646 ntBASIC10.55□□□□□ -0.72
Pde6dO55057 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC10.55□□□□□ -0.72
Pde6dO55057 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Pde6dO55057 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 AC166997.1-201ENSMUST00000225122 572 ntBASIC10.55□□□□□ -0.72
Pde6dO55057 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Pde6dO55057 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.55□□□□□ -0.72
Pde6dO55057 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Pde6dO55057 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Pde6dO55057 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.55□□□□□ -0.72
Pde6dO55057 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pde6dO55057 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Pde6dO55057 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.54□□□□□ -0.72
Pde6dO55057 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Gm7284-201ENSMUST00000131667 944 ntBASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms