Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limk2O54785 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limk2O54785 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limk2O54785 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limk2O54785 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.61□□□□□ -0.23
Limk2O54785 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limk2O54785 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limk2O54785 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.61□□□□□ -0.23
Limk2O54785 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limk2O54785 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limk2O54785 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Limk2O54785 Acot6-202ENSMUST00000222921 3622 ntBASIC13.61□□□□□ -0.23
Limk2O54785 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limk2O54785 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limk2O54785 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limk2O54785 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.61□□□□□ -0.23
Limk2O54785 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limk2O54785 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limk2O54785 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limk2O54785 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Limk2O54785 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limk2O54785 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Limk2O54785 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Limk2O54785 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Limk2O54785 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limk2O54785 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.6□□□□□ -0.23
Limk2O54785 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limk2O54785 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Limk2O54785 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Limk2O54785 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limk2O54785 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limk2O54785 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limk2O54785 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Limk2O54785 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Limk2O54785 Gm15371-201ENSMUST00000117057 784 ntBASIC13.6□□□□□ -0.23
Limk2O54785 Gm13226-201ENSMUST00000117838 404 ntBASIC13.6□□□□□ -0.23
Limk2O54785 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.6□□□□□ -0.23
Limk2O54785 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Limk2O54785 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.6□□□□□ -0.23
Limk2O54785 Gm29608-201ENSMUST00000190444 463 ntBASIC13.6□□□□□ -0.23
Limk2O54785 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.6□□□□□ -0.23
Limk2O54785 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Limk2O54785 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limk2O54785 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.6□□□□□ -0.23
Limk2O54785 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limk2O54785 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
Limk2O54785 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limk2O54785 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Limk2O54785 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limk2O54785 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Limk2O54785 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limk2O54785 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limk2O54785 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Limk2O54785 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limk2O54785 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limk2O54785 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Limk2O54785 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Limk2O54785 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Limk2O54785 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Limk2O54785 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Limk2O54785 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Limk2O54785 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Limk2O54785 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Limk2O54785 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.59□□□□□ -0.23
Limk2O54785 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Limk2O54785 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Limk2O54785 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Limk2O54785 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Limk2O54785 Gm2495-201ENSMUST00000191160 466 ntBASIC13.59□□□□□ -0.23
Limk2O54785 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.59□□□□□ -0.23
Limk2O54785 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.59□□□□□ -0.23
Limk2O54785 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Limk2O54785 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Limk2O54785 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Limk2O54785 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Limk2O54785 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Limk2O54785 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Limk2O54785 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Limk2O54785 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Limk2O54785 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Limk2O54785 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Limk2O54785 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Limk2O54785 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Limk2O54785 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Limk2O54785 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Limk2O54785 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Limk2O54785 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Limk2O54785 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Limk2O54785 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.58□□□□□ -0.23
Limk2O54785 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Limk2O54785 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Limk2O54785 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms