Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Syce3B5KM66 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syce3B5KM66 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syce3B5KM66 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Syce3B5KM66 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Syce3B5KM66 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syce3B5KM66 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.32■□□□□ 0.04
Syce3B5KM66 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.32■□□□□ 0.04
Syce3B5KM66 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syce3B5KM66 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syce3B5KM66 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Syce3B5KM66 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.32■□□□□ 0.04
Syce3B5KM66 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.32■□□□□ 0.04
Syce3B5KM66 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.32■□□□□ 0.04
Syce3B5KM66 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syce3B5KM66 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syce3B5KM66 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Syce3B5KM66 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syce3B5KM66 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syce3B5KM66 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syce3B5KM66 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syce3B5KM66 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.32■□□□□ 0.04
Syce3B5KM66 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syce3B5KM66 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Syce3B5KM66 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syce3B5KM66 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.32■□□□□ 0.04
Syce3B5KM66 Gm7049-201ENSMUST00000223520 1712 ntBASIC15.31■□□□□ 0.04
Syce3B5KM66 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Syce3B5KM66 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Syce3B5KM66 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.31■□□□□ 0.04
Syce3B5KM66 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.31■□□□□ 0.04
Syce3B5KM66 Gm9727-201ENSMUST00000161387 555 ntBASIC15.31■□□□□ 0.04
Syce3B5KM66 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.31■□□□□ 0.04
Syce3B5KM66 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.31■□□□□ 0.04
Syce3B5KM66 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syce3B5KM66 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC15.3■□□□□ 0.04
Syce3B5KM66 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syce3B5KM66 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syce3B5KM66 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syce3B5KM66 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Syce3B5KM66 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syce3B5KM66 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syce3B5KM66 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.3■□□□□ 0.04
Syce3B5KM66 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syce3B5KM66 Gm1401-201ENSMUST00000122048 772 ntBASIC15.3■□□□□ 0.04
Syce3B5KM66 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Syce3B5KM66 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syce3B5KM66 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syce3B5KM66 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Syce3B5KM66 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syce3B5KM66 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.3■□□□□ 0.04
Syce3B5KM66 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Syce3B5KM66 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Syce3B5KM66 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.3■□□□□ 0.04
Syce3B5KM66 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.3■□□□□ 0.04
Syce3B5KM66 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syce3B5KM66 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Syce3B5KM66 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Syce3B5KM66 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syce3B5KM66 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syce3B5KM66 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Syce3B5KM66 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syce3B5KM66 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syce3B5KM66 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syce3B5KM66 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syce3B5KM66 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syce3B5KM66 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Syce3B5KM66 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
Syce3B5KM66 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Syce3B5KM66 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syce3B5KM66 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syce3B5KM66 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Syce3B5KM66 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syce3B5KM66 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.29■□□□□ 0.04
Syce3B5KM66 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Syce3B5KM66 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.29■□□□□ 0.04
Syce3B5KM66 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.29■□□□□ 0.04
Syce3B5KM66 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms