Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Gm5745-201ENSMUST00000183748 313 ntBASIC11.95□□□□□ -0.5
Nubp2Q9R061 Gm28760-201ENSMUST00000185995 736 ntBASIC11.95□□□□□ -0.5
Nubp2Q9R061 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Gm5425-201ENSMUST00000214125 459 ntBASIC11.95□□□□□ -0.5
Nubp2Q9R061 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.95□□□□□ -0.5
Nubp2Q9R061 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nubp2Q9R061 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nubp2Q9R061 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.94□□□□□ -0.5
Nubp2Q9R061 Gm11424-201ENSMUST00000121929 829 ntBASIC11.94□□□□□ -0.5
Nubp2Q9R061 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Nubp2Q9R061 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Gm10766-202ENSMUST00000194123 606 ntBASIC11.94□□□□□ -0.5
Nubp2Q9R061 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Gm5186-201ENSMUST00000218781 920 ntBASIC11.94□□□□□ -0.5
Nubp2Q9R061 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.94□□□□□ -0.5
Nubp2Q9R061 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.94□□□□□ -0.5
Nubp2Q9R061 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nubp2Q9R061 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nubp2Q9R061 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nubp2Q9R061 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nubp2Q9R061 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nubp2Q9R061 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nubp2Q9R061 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nubp2Q9R061 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nubp2Q9R061 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nubp2Q9R061 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nubp2Q9R061 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nubp2Q9R061 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nubp2Q9R061 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nubp2Q9R061 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nubp2Q9R061 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nubp2Q9R061 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nubp2Q9R061 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nubp2Q9R061 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nubp2Q9R061 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nubp2Q9R061 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms