Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ube4bQ9ES00 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.87□□□□□ -0.35
Ube4bQ9ES00 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Gm37230-201ENSMUST00000194491 818 ntBASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ube4bQ9ES00 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.87□□□□□ -0.35
Ube4bQ9ES00 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Gm9727-201ENSMUST00000161387 555 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms