Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim3Q99PE5 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Smim3Q99PE5 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Smim3Q99PE5 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim3Q99PE5 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim3Q99PE5 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim3Q99PE5 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Smim3Q99PE5 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Smim3Q99PE5 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim3Q99PE5 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Smim3Q99PE5 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.41□□□□□ -0.58
Smim3Q99PE5 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.41□□□□□ -0.58
Smim3Q99PE5 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.41□□□□□ -0.58
Smim3Q99PE5 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Smim3Q99PE5 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.41□□□□□ -0.58
Smim3Q99PE5 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.41□□□□□ -0.58
Smim3Q99PE5 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Gm5177-201ENSMUST00000183092 997 ntBASIC11.41□□□□□ -0.58
Smim3Q99PE5 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Gm7461-201ENSMUST00000058918 827 ntBASIC11.41□□□□□ -0.58
Smim3Q99PE5 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.41□□□□□ -0.58
Smim3Q99PE5 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim3Q99PE5 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.4□□□□□ -0.58
Smim3Q99PE5 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.4□□□□□ -0.58
Smim3Q99PE5 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Rps4l-201ENSMUST00000071745 943 ntBASIC11.4□□□□□ -0.58
Smim3Q99PE5 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.4□□□□□ -0.58
Smim3Q99PE5 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.4□□□□□ -0.58
Smim3Q99PE5 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim3Q99PE5 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Smim3Q99PE5 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Smim3Q99PE5 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Smim3Q99PE5 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
Smim3Q99PE5 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Smim3Q99PE5 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
Smim3Q99PE5 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim3Q99PE5 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smim3Q99PE5 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim3Q99PE5 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.39□□□□□ -0.59
Smim3Q99PE5 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim3Q99PE5 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim3Q99PE5 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim3Q99PE5 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim3Q99PE5 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smim3Q99PE5 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms