Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nkx6-1Q99MA9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.58□□□□□ -0.39
Nkx6-1Q99MA9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.58□□□□□ -0.39
Nkx6-1Q99MA9 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Gm2231-201ENSMUST00000125661 612 ntBASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx6-1Q99MA9 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.57□□□□□ -0.4
Nkx6-1Q99MA9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx6-1Q99MA9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms