Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf8Q8VC56 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rnf8Q8VC56 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf8Q8VC56 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rnf8Q8VC56 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf8Q8VC56 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf8Q8VC56 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf8Q8VC56 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf8Q8VC56 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf8Q8VC56 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.99□□□□□ -0.33
Rnf8Q8VC56 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf8Q8VC56 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf8Q8VC56 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Gm33320-201ENSMUST00000192232 530 ntBASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf8Q8VC56 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Gm12585-201ENSMUST00000117307 290 ntBASIC12.97□□□□□ -0.33
Rnf8Q8VC56 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.97□□□□□ -0.33
Rnf8Q8VC56 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf8Q8VC56 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms