Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.91■□□□□ 0.14
Gtf3c5Q8R2T8 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Gtf3c5Q8R2T8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gtf3c5Q8R2T8 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gtf3c5Q8R2T8 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.91■□□□□ 0.14
Gtf3c5Q8R2T8 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Gtf3c5Q8R2T8 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.91■□□□□ 0.14
Gtf3c5Q8R2T8 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gtf3c5Q8R2T8 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gtf3c5Q8R2T8 Gm24447-201ENSMUST00000083977 338 ntBASIC15.91■□□□□ 0.14
Gtf3c5Q8R2T8 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gtf3c5Q8R2T8 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.91■□□□□ 0.14
Gtf3c5Q8R2T8 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gtf3c5Q8R2T8 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gtf3c5Q8R2T8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Gtf3c5Q8R2T8 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Gtf3c5Q8R2T8 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gtf3c5Q8R2T8 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gtf3c5Q8R2T8 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gtf3c5Q8R2T8 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Gtf3c5Q8R2T8 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.91■□□□□ 0.14
Gtf3c5Q8R2T8 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Gm11524-201ENSMUST00000119349 807 ntBASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Gm19078-201ENSMUST00000206311 727 ntBASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 AC122881.1-201ENSMUST00000225757 2695 ntBASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gtf3c5Q8R2T8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Gm5380-201ENSMUST00000119296 2136 ntBASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Gm6157-201ENSMUST00000199935 1897 ntBASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Gm12859-201ENSMUST00000117834 427 ntBASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 AC169511.2-201ENSMUST00000226674 2063 ntBASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 AC131586.1-201ENSMUST00000228844 2964 ntBASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Gtf3c5Q8R2T8 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Gtf3c5Q8R2T8 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gtf3c5Q8R2T8 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gtf3c5Q8R2T8 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gtf3c5Q8R2T8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gtf3c5Q8R2T8 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Gtf3c5Q8R2T8 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms