Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Gm27533-201ENSMUST00000183800 152 ntBASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Gm27631-201ENSMUST00000184163 466 ntBASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Gm20949-201ENSMUST00000206478 952 ntBASIC12.01□□□□□ -0.49
Rft1Q8C3B8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rft1Q8C3B8 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rft1Q8C3B8 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rft1Q8C3B8 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12□□□□□ -0.49
Rft1Q8C3B8 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Gm14767-201ENSMUST00000121559 586 ntBASIC12□□□□□ -0.49
Rft1Q8C3B8 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12□□□□□ -0.49
Rft1Q8C3B8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12□□□□□ -0.49
Rft1Q8C3B8 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 AC149588.3-201ENSMUST00000227515 150 ntBASIC12□□□□□ -0.49
Rft1Q8C3B8 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12□□□□□ -0.49
Rft1Q8C3B8 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rft1Q8C3B8 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12□□□□□ -0.49
Rft1Q8C3B8 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rft1Q8C3B8 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rft1Q8C3B8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms