Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Rnf139Q7TMV1 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.36□□□□□ -0.11
Rnf139Q7TMV1 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf139Q7TMV1 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rnf139Q7TMV1 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf139Q7TMV1 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.36□□□□□ -0.11
Rnf139Q7TMV1 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.36□□□□□ -0.11
Rnf139Q7TMV1 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf139Q7TMV1 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf139Q7TMV1 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf139Q7TMV1 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Gm12490-201ENSMUST00000120255 560 ntBASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf139Q7TMV1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Gm12928-201ENSMUST00000117115 573 ntBASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Gm7063-201ENSMUST00000186840 981 ntBASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf139Q7TMV1 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.33□□□□□ -0.11
Rnf139Q7TMV1 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf139Q7TMV1 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf139Q7TMV1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Rnf139Q7TMV1 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf139Q7TMV1 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf139Q7TMV1 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf139Q7TMV1 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf139Q7TMV1 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf139Q7TMV1 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf139Q7TMV1 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf139Q7TMV1 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms