Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Six4Q61321 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Six4Q61321 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six4Q61321 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six4Q61321 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six4Q61321 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six4Q61321 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.54□□□□□ -0.24
Six4Q61321 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Six4Q61321 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.54□□□□□ -0.24
Six4Q61321 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.54□□□□□ -0.24
Six4Q61321 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.54□□□□□ -0.24
Six4Q61321 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.54□□□□□ -0.24
Six4Q61321 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six4Q61321 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Six4Q61321 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Six4Q61321 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Six4Q61321 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six4Q61321 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six4Q61321 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six4Q61321 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six4Q61321 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six4Q61321 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six4Q61321 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.54□□□□□ -0.24
Six4Q61321 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six4Q61321 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six4Q61321 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six4Q61321 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six4Q61321 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.53□□□□□ -0.24
Six4Q61321 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Six4Q61321 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Six4Q61321 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Six4Q61321 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Gm6447-201ENSMUST00000118905 835 ntBASIC13.53□□□□□ -0.24
Six4Q61321 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.53□□□□□ -0.24
Six4Q61321 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.53□□□□□ -0.24
Six4Q61321 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.53□□□□□ -0.24
Six4Q61321 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.53□□□□□ -0.24
Six4Q61321 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.53□□□□□ -0.24
Six4Q61321 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six4Q61321 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Six4Q61321 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.24
Six4Q61321 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Six4Q61321 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.52□□□□□ -0.24
Six4Q61321 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Six4Q61321 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Six4Q61321 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Six4Q61321 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.52□□□□□ -0.24
Six4Q61321 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Six4Q61321 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Six4Q61321 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Six4Q61321 Gm5687-201ENSMUST00000118252 640 ntBASIC13.52□□□□□ -0.25
Six4Q61321 Gm11424-201ENSMUST00000121929 829 ntBASIC13.52□□□□□ -0.25
Six4Q61321 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six4Q61321 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six4Q61321 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.52□□□□□ -0.25
Six4Q61321 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six4Q61321 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six4Q61321 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six4Q61321 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Six4Q61321 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Six4Q61321 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Six4Q61321 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.52□□□□□ -0.25
Six4Q61321 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six4Q61321 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six4Q61321 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six4Q61321 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Six4Q61321 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six4Q61321 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six4Q61321 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six4Q61321 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six4Q61321 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six4Q61321 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.52□□□□□ -0.25
Six4Q61321 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.52□□□□□ -0.25
Six4Q61321 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Six4Q61321 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms