Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.7□□□□□ -0.06
Col11a1Q61245 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col11a1Q61245 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col11a1Q61245 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col11a1Q61245 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col11a1Q61245 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col11a1Q61245 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col11a1Q61245 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col11a1Q61245 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.7□□□□□ -0.06
Col11a1Q61245 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Col11a1Q61245 Gm14832-201ENSMUST00000121289 322 ntBASIC14.7□□□□□ -0.06
Col11a1Q61245 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Col11a1Q61245 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col11a1Q61245 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col11a1Q61245 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col11a1Q61245 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.7□□□□□ -0.06
Col11a1Q61245 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.7□□□□□ -0.06
Col11a1Q61245 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col11a1Q61245 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col11a1Q61245 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col11a1Q61245 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col11a1Q61245 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col11a1Q61245 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col11a1Q61245 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col11a1Q61245 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.7□□□□□ -0.06
Col11a1Q61245 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col11a1Q61245 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Col11a1Q61245 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col11a1Q61245 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col11a1Q61245 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col11a1Q61245 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col11a1Q61245 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col11a1Q61245 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col11a1Q61245 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.69□□□□□ -0.06
Col11a1Q61245 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.69□□□□□ -0.06
Col11a1Q61245 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col11a1Q61245 Mir6958-201ENSMUST00000184207 73 ntBASIC14.69□□□□□ -0.06
Col11a1Q61245 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
Col11a1Q61245 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.69□□□□□ -0.06
Col11a1Q61245 Mir339-201ENSMUST00000083659 96 ntBASIC14.69□□□□□ -0.06
Col11a1Q61245 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col11a1Q61245 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Col11a1Q61245 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col11a1Q61245 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.69□□□□□ -0.06
Col11a1Q61245 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col11a1Q61245 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col11a1Q61245 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col11a1Q61245 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.69□□□□□ -0.06
Col11a1Q61245 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col11a1Q61245 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.69□□□□□ -0.06
Col11a1Q61245 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col11a1Q61245 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.69□□□□□ -0.06
Col11a1Q61245 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col11a1Q61245 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col11a1Q61245 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Col11a1Q61245 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col11a1Q61245 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col11a1Q61245 Gm5070-201ENSMUST00000177599 862 ntBASIC14.69□□□□□ -0.06
Col11a1Q61245 Mir6546-201ENSMUST00000184460 62 ntBASIC14.69□□□□□ -0.06
Col11a1Q61245 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.69□□□□□ -0.06
Col11a1Q61245 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.69□□□□□ -0.06
Col11a1Q61245 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.69□□□□□ -0.06
Col11a1Q61245 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC14.69□□□□□ -0.06
Col11a1Q61245 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.69□□□□□ -0.06
Col11a1Q61245 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col11a1Q61245 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col11a1Q61245 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a1Q61245 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a1Q61245 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Col11a1Q61245 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a1Q61245 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.68□□□□□ -0.06
Col11a1Q61245 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a1Q61245 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a1Q61245 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a1Q61245 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a1Q61245 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.68□□□□□ -0.06
Col11a1Q61245 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a1Q61245 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a1Q61245 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a1Q61245 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a1Q61245 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a1Q61245 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a1Q61245 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a1Q61245 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Col11a1Q61245 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.68□□□□□ -0.06
Col11a1Q61245 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a1Q61245 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
Col11a1Q61245 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a1Q61245 Gm19994-201ENSMUST00000217086 586 ntBASIC14.68□□□□□ -0.06
Col11a1Q61245 Gm45925-201ENSMUST00000218882 744 ntBASIC14.68□□□□□ -0.06
Col11a1Q61245 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.68□□□□□ -0.06
Col11a1Q61245 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.68□□□□□ -0.06
Col11a1Q61245 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
Col11a1Q61245 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Col11a1Q61245 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a1Q61245 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a1Q61245 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.68□□□□□ -0.06
Col11a1Q61245 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.68□□□□□ -0.06
Col11a1Q61245 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a1Q61245 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms