Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Gm11779-201ENSMUST00000118541 368 ntBASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Gm5264-201ENSMUST00000190584 848 ntBASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ccbe1Q3MI99 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ccbe1Q3MI99 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ccbe1Q3MI99 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Gm2213-201ENSMUST00000197485 688 ntBASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccbe1Q3MI99 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Gm9682-201ENSMUST00000197505 556 ntBASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms