Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4bP46467 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4bP46467 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4bP46467 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4bP46467 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4bP46467 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4bP46467 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4bP46467 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4bP46467 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4bP46467 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4bP46467 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4bP46467 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Vps4bP46467 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.23
Vps4bP46467 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Vps4bP46467 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.64□□□□□ -0.23
Vps4bP46467 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.64□□□□□ -0.23
Vps4bP46467 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.64□□□□□ -0.23
Vps4bP46467 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Vps4bP46467 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Vps4bP46467 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Vps4bP46467 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Vps4bP46467 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.64□□□□□ -0.23
Vps4bP46467 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.64□□□□□ -0.23
Vps4bP46467 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Mir8102-201ENSMUST00000184148 139 ntBASIC13.64□□□□□ -0.23
Vps4bP46467 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.64□□□□□ -0.23
Vps4bP46467 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.64□□□□□ -0.23
Vps4bP46467 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.64□□□□□ -0.23
Vps4bP46467 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Vps4bP46467 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Vps4bP46467 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Vps4bP46467 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Vps4bP46467 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Vps4bP46467 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.64□□□□□ -0.23
Vps4bP46467 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4bP46467 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Vps4bP46467 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Vps4bP46467 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Vps4bP46467 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.63□□□□□ -0.23
Vps4bP46467 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Vps4bP46467 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.63□□□□□ -0.23
Vps4bP46467 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.63□□□□□ -0.23
Vps4bP46467 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms