Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.52□□□□□ -0.25
Fen1P39749 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fen1P39749 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fen1P39749 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fen1P39749 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fen1P39749 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fen1P39749 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fen1P39749 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.52□□□□□ -0.25
Fen1P39749 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fen1P39749 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Fen1P39749 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fen1P39749 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fen1P39749 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fen1P39749 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
Fen1P39749 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fen1P39749 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fen1P39749 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Fen1P39749 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fen1P39749 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fen1P39749 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fen1P39749 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Fen1P39749 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.51□□□□□ -0.25
Fen1P39749 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.51□□□□□ -0.25
Fen1P39749 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Fen1P39749 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.51□□□□□ -0.25
Fen1P39749 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.51□□□□□ -0.25
Fen1P39749 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 Gm15920-201ENSMUST00000118998 402 ntBASIC13.51□□□□□ -0.25
Fen1P39749 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.51□□□□□ -0.25
Fen1P39749 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 Gm27631-201ENSMUST00000184163 466 ntBASIC13.51□□□□□ -0.25
Fen1P39749 Gm27494-201ENSMUST00000184735 189 ntBASIC13.51□□□□□ -0.25
Fen1P39749 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.51□□□□□ -0.25
Fen1P39749 Gm45453-201ENSMUST00000211758 853 ntBASIC13.51□□□□□ -0.25
Fen1P39749 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.51□□□□□ -0.25
Fen1P39749 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Fen1P39749 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.51□□□□□ -0.25
Fen1P39749 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Fen1P39749 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.51□□□□□ -0.25
Fen1P39749 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.51□□□□□ -0.25
Fen1P39749 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Fen1P39749 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Fen1P39749 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Fen1P39749 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.51□□□□□ -0.25
Fen1P39749 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Fen1P39749 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.5□□□□□ -0.25
Fen1P39749 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.5□□□□□ -0.25
Fen1P39749 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.5□□□□□ -0.25
Fen1P39749 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Fen1P39749 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.5□□□□□ -0.25
Fen1P39749 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Paupar-201ENSMUST00000194826 3482 ntBASIC13.5□□□□□ -0.25
Fen1P39749 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.5□□□□□ -0.25
Fen1P39749 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.5□□□□□ -0.25
Fen1P39749 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Fen1P39749 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Fen1P39749 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Fen1P39749 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms