Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ubr1O70481 Gm16505-201ENSMUST00000179981 232 ntBASIC17.1■□□□□ 0.33
Ubr1O70481 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC17.1■□□□□ 0.33
Ubr1O70481 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ubr1O70481 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr1O70481 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ubr1O70481 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ubr1O70481 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr1O70481 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr1O70481 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr1O70481 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr1O70481 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr1O70481 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr1O70481 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr1O70481 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr1O70481 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr1O70481 Gm11405-201ENSMUST00000118689 1556 ntBASIC17.09■□□□□ 0.33
Ubr1O70481 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr1O70481 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr1O70481 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr1O70481 Gm15547-201ENSMUST00000122152 333 ntBASIC17.09■□□□□ 0.33
Ubr1O70481 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC17.09■□□□□ 0.33
Ubr1O70481 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr1O70481 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC17.09■□□□□ 0.33
Ubr1O70481 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC17.09■□□□□ 0.33
Ubr1O70481 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC17.09■□□□□ 0.33
Ubr1O70481 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr1O70481 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr1O70481 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ubr1O70481 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr1O70481 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ubr1O70481 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr1O70481 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr1O70481 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ubr1O70481 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ubr1O70481 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ubr1O70481 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ubr1O70481 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ubr1O70481 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ubr1O70481 Gm23200-201ENSMUST00000104379 132 ntBASIC17.08■□□□□ 0.33
Ubr1O70481 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Ubr1O70481 Gm12176-201ENSMUST00000121420 875 ntBASIC17.08■□□□□ 0.33
Ubr1O70481 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Ubr1O70481 Gm44967-201ENSMUST00000207047 631 ntBASIC17.08■□□□□ 0.33
Ubr1O70481 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC17.08■□□□□ 0.33
Ubr1O70481 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC17.08■□□□□ 0.33
Ubr1O70481 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ubr1O70481 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubr1O70481 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ubr1O70481 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubr1O70481 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC17.08■□□□□ 0.32
Ubr1O70481 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubr1O70481 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubr1O70481 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubr1O70481 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubr1O70481 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubr1O70481 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubr1O70481 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubr1O70481 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubr1O70481 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ubr1O70481 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubr1O70481 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubr1O70481 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubr1O70481 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr1O70481 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr1O70481 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr1O70481 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC17.07■□□□□ 0.32
Ubr1O70481 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC17.07■□□□□ 0.32
Ubr1O70481 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC17.07■□□□□ 0.32
Ubr1O70481 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr1O70481 Mir6927-201ENSMUST00000184494 71 ntBASIC17.07■□□□□ 0.32
Ubr1O70481 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr1O70481 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr1O70481 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr1O70481 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr1O70481 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr1O70481 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Ubr1O70481 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC17.07■□□□□ 0.32
Ubr1O70481 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr1O70481 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ubr1O70481 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr1O70481 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr1O70481 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr1O70481 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Ubr1O70481 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ubr1O70481 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr1O70481 Gm24845-201ENSMUST00000158034 109 ntBASIC17.07■□□□□ 0.32
Ubr1O70481 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ubr1O70481 Mir3547-201ENSMUST00000175461 88 ntBASIC17.07■□□□□ 0.32
Ubr1O70481 Gm8856-201ENSMUST00000185254 1144 ntBASIC17.07■□□□□ 0.32
Ubr1O70481 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr1O70481 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr1O70481 Gm9025-201ENSMUST00000122415 1575 ntBASIC17.07■□□□□ 0.32
Ubr1O70481 AC113060.1-201ENSMUST00000225689 1573 ntBASIC17.07■□□□□ 0.32
Ubr1O70481 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr1O70481 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms