Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.38□□□□□ -0.59
Gm3727J3QM54 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.38□□□□□ -0.59
Gm3727J3QM54 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Gm7153-201ENSMUST00000117092 455 ntBASIC11.38□□□□□ -0.59
Gm3727J3QM54 Gm15678-201ENSMUST00000117573 960 ntBASIC11.38□□□□□ -0.59
Gm3727J3QM54 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.38□□□□□ -0.59
Gm3727J3QM54 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.38□□□□□ -0.59
Gm3727J3QM54 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Gm3727J3QM54 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3727J3QM54 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.37□□□□□ -0.59
Gm3727J3QM54 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.37□□□□□ -0.59
Gm3727J3QM54 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.37□□□□□ -0.59
Gm3727J3QM54 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.37□□□□□ -0.59
Gm3727J3QM54 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Gm3727J3QM54 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.37□□□□□ -0.59
Gm3727J3QM54 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3727J3QM54 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms