Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm12350-201ENSMUST00000121208 462 ntBASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm13597-201ENSMUST00000121239 375 ntBASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm12882-201ENSMUST00000121696 517 ntBASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 AC154572.2-201ENSMUST00000225105 997 ntBASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm9109-201ENSMUST00000120254 1405 ntBASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm10459-201ENSMUST00000202708 1155 ntBASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm44608-201ENSMUST00000206827 855 ntBASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms