Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gm12366-201ENSMUST00000121722 873 ntBASIC21.72■■□□□ 1.07
Msh5Q9QUM7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.72■■□□□ 1.07
Msh5Q9QUM7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.72■■□□□ 1.07
Msh5Q9QUM7 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.72■■□□□ 1.07
Msh5Q9QUM7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.72■■□□□ 1.07
Msh5Q9QUM7 Gm5786-201ENSMUST00000085368 882 ntBASIC21.72■■□□□ 1.07
Msh5Q9QUM7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh5Q9QUM7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.72■■□□□ 1.07
Msh5Q9QUM7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh5Q9QUM7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh5Q9QUM7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Msh5Q9QUM7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.71■■□□□ 1.07
Msh5Q9QUM7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Msh5Q9QUM7 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Msh5Q9QUM7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.71■■□□□ 1.07
Msh5Q9QUM7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.71■■□□□ 1.07
Msh5Q9QUM7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Msh5Q9QUM7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Msh5Q9QUM7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Msh5Q9QUM7 Gm14523-201ENSMUST00000117260 558 ntBASIC21.7■■□□□ 1.06
Msh5Q9QUM7 Gm42790-201ENSMUST00000201268 969 ntBASIC21.7■■□□□ 1.06
Msh5Q9QUM7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Msh5Q9QUM7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Msh5Q9QUM7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Msh5Q9QUM7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Msh5Q9QUM7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Msh5Q9QUM7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.69■■□□□ 1.06
Msh5Q9QUM7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Msh5Q9QUM7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Msh5Q9QUM7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Msh5Q9QUM7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Msh5Q9QUM7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Msh5Q9QUM7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Msh5Q9QUM7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Msh5Q9QUM7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Msh5Q9QUM7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Msh5Q9QUM7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.68■■□□□ 1.06
Msh5Q9QUM7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Msh5Q9QUM7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.68■■□□□ 1.06
Msh5Q9QUM7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Msh5Q9QUM7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Msh5Q9QUM7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Msh5Q9QUM7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Msh5Q9QUM7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Msh5Q9QUM7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Msh5Q9QUM7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Msh5Q9QUM7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Msh5Q9QUM7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Msh5Q9QUM7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Msh5Q9QUM7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Msh5Q9QUM7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.66■■□□□ 1.06
Msh5Q9QUM7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Msh5Q9QUM7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Msh5Q9QUM7 Cap2-205ENSMUST00000225824 1634 ntBASIC21.66■■□□□ 1.06
Msh5Q9QUM7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Msh5Q9QUM7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Msh5Q9QUM7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Msh5Q9QUM7 Gm7332-201ENSMUST00000118351 454 ntBASIC21.65■■□□□ 1.06
Msh5Q9QUM7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.65■■□□□ 1.06
Msh5Q9QUM7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Msh5Q9QUM7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Msh5Q9QUM7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Msh5Q9QUM7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Msh5Q9QUM7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Msh5Q9QUM7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Msh5Q9QUM7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Msh5Q9QUM7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.64■■□□□ 1.05
Msh5Q9QUM7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Msh5Q9QUM7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Msh5Q9QUM7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Msh5Q9QUM7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Msh5Q9QUM7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Msh5Q9QUM7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh5Q9QUM7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh5Q9QUM7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh5Q9QUM7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Msh5Q9QUM7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh5Q9QUM7 Gm37444-201ENSMUST00000193605 439 ntBASIC21.62■■□□□ 1.05
Msh5Q9QUM7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh5Q9QUM7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Msh5Q9QUM7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh5Q9QUM7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.62■■□□□ 1.05
Msh5Q9QUM7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Msh5Q9QUM7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh5Q9QUM7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Msh5Q9QUM7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Msh5Q9QUM7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Msh5Q9QUM7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.61■■□□□ 1.05
Msh5Q9QUM7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.61■■□□□ 1.05
Msh5Q9QUM7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Msh5Q9QUM7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Msh5Q9QUM7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
Msh5Q9QUM7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Msh5Q9QUM7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Msh5Q9QUM7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.6■■□□□ 1.05
Msh5Q9QUM7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Msh5Q9QUM7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Msh5Q9QUM7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Msh5Q9QUM7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Msh5Q9QUM7 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms