Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.65■■□□□ 1.22
Scn5aQ9JJV9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.65■■□□□ 1.22
Scn5aQ9JJV9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.65■■□□□ 1.22
Scn5aQ9JJV9 Gm27454-201ENSMUST00000185090 204 ntBASIC22.65■■□□□ 1.22
Scn5aQ9JJV9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Scn5aQ9JJV9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scn5aQ9JJV9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Scn5aQ9JJV9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.64■■□□□ 1.21
Scn5aQ9JJV9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scn5aQ9JJV9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Scn5aQ9JJV9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scn5aQ9JJV9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scn5aQ9JJV9 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.62■■□□□ 1.21
Scn5aQ9JJV9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scn5aQ9JJV9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scn5aQ9JJV9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.62■■□□□ 1.21
Scn5aQ9JJV9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scn5aQ9JJV9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scn5aQ9JJV9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scn5aQ9JJV9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Scn5aQ9JJV9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scn5aQ9JJV9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scn5aQ9JJV9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Scn5aQ9JJV9 Gm45417-201ENSMUST00000209533 758 ntBASIC22.61■■□□□ 1.21
Scn5aQ9JJV9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Scn5aQ9JJV9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Scn5aQ9JJV9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Scn5aQ9JJV9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Scn5aQ9JJV9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.6■■□□□ 1.21
Scn5aQ9JJV9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Scn5aQ9JJV9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.59■■□□□ 1.21
Scn5aQ9JJV9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scn5aQ9JJV9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Scn5aQ9JJV9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.59■■□□□ 1.21
Scn5aQ9JJV9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scn5aQ9JJV9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scn5aQ9JJV9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scn5aQ9JJV9 Serp2-204ENSMUST00000228055 705 ntBASIC22.58■■□□□ 1.21
Scn5aQ9JJV9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Scn5aQ9JJV9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.58■■□□□ 1.2
Scn5aQ9JJV9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scn5aQ9JJV9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scn5aQ9JJV9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC22.57■■□□□ 1.2
Scn5aQ9JJV9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scn5aQ9JJV9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scn5aQ9JJV9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scn5aQ9JJV9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Scn5aQ9JJV9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Scn5aQ9JJV9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scn5aQ9JJV9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Scn5aQ9JJV9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scn5aQ9JJV9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scn5aQ9JJV9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.56■■□□□ 1.2
Scn5aQ9JJV9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Scn5aQ9JJV9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Scn5aQ9JJV9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.55■■□□□ 1.2
Scn5aQ9JJV9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scn5aQ9JJV9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Scn5aQ9JJV9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Scn5aQ9JJV9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scn5aQ9JJV9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Scn5aQ9JJV9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scn5aQ9JJV9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Scn5aQ9JJV9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Scn5aQ9JJV9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC22.53■■□□□ 1.2
Scn5aQ9JJV9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scn5aQ9JJV9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Scn5aQ9JJV9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC22.52■■□□□ 1.2
Scn5aQ9JJV9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Scn5aQ9JJV9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Scn5aQ9JJV9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.52■■□□□ 1.2
Scn5aQ9JJV9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Scn5aQ9JJV9 Golgb1-201ENSMUST00000023534 498 ntBASIC22.52■■□□□ 1.19
Scn5aQ9JJV9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Scn5aQ9JJV9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Scn5aQ9JJV9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
Scn5aQ9JJV9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Scn5aQ9JJV9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Scn5aQ9JJV9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Scn5aQ9JJV9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.51■■□□□ 1.19
Scn5aQ9JJV9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Scn5aQ9JJV9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Scn5aQ9JJV9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Scn5aQ9JJV9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.5■■□□□ 1.19
Scn5aQ9JJV9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Scn5aQ9JJV9 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.5■■□□□ 1.19
Scn5aQ9JJV9 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.5■■□□□ 1.19
Scn5aQ9JJV9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Scn5aQ9JJV9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Scn5aQ9JJV9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Scn5aQ9JJV9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Scn5aQ9JJV9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Scn5aQ9JJV9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Scn5aQ9JJV9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Scn5aQ9JJV9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.49■■□□□ 1.19
Scn5aQ9JJV9 Gm12821-201ENSMUST00000120022 600 ntBASIC22.49■■□□□ 1.19
Scn5aQ9JJV9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Scn5aQ9JJV9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Scn5aQ9JJV9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Scn5aQ9JJV9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 202.4 ms