Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube4bQ9ES00 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ube4bQ9ES00 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.52■□□□□ 0.88
Ube4bQ9ES00 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ube4bQ9ES00 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.52■□□□□ 0.88
Ube4bQ9ES00 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.52■□□□□ 0.88
Ube4bQ9ES00 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube4bQ9ES00 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ube4bQ9ES00 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube4bQ9ES00 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ube4bQ9ES00 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ube4bQ9ES00 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube4bQ9ES00 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube4bQ9ES00 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ube4bQ9ES00 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ube4bQ9ES00 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube4bQ9ES00 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Ube4bQ9ES00 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube4bQ9ES00 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ube4bQ9ES00 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ube4bQ9ES00 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube4bQ9ES00 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube4bQ9ES00 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.49■□□□□ 0.87
Ube4bQ9ES00 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube4bQ9ES00 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
Ube4bQ9ES00 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube4bQ9ES00 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ube4bQ9ES00 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.48■□□□□ 0.87
Ube4bQ9ES00 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube4bQ9ES00 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ube4bQ9ES00 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ube4bQ9ES00 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ube4bQ9ES00 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.46■□□□□ 0.87
Ube4bQ9ES00 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube4bQ9ES00 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.46■□□□□ 0.87
Ube4bQ9ES00 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube4bQ9ES00 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube4bQ9ES00 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube4bQ9ES00 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube4bQ9ES00 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube4bQ9ES00 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube4bQ9ES00 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.45■□□□□ 0.86
Ube4bQ9ES00 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube4bQ9ES00 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.44■□□□□ 0.86
Ube4bQ9ES00 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ube4bQ9ES00 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ube4bQ9ES00 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ube4bQ9ES00 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ube4bQ9ES00 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.44■□□□□ 0.86
Ube4bQ9ES00 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Ube4bQ9ES00 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.43■□□□□ 0.86
Ube4bQ9ES00 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Ube4bQ9ES00 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube4bQ9ES00 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ube4bQ9ES00 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube4bQ9ES00 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Ube4bQ9ES00 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube4bQ9ES00 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ube4bQ9ES00 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ube4bQ9ES00 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ube4bQ9ES00 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ube4bQ9ES00 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ube4bQ9ES00 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ube4bQ9ES00 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
Ube4bQ9ES00 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ube4bQ9ES00 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.42■□□□□ 0.86
Ube4bQ9ES00 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.42■□□□□ 0.86
Ube4bQ9ES00 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ube4bQ9ES00 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Ube4bQ9ES00 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube4bQ9ES00 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Ube4bQ9ES00 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube4bQ9ES00 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.41■□□□□ 0.86
Ube4bQ9ES00 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.41■□□□□ 0.86
Ube4bQ9ES00 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ube4bQ9ES00 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Ube4bQ9ES00 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ube4bQ9ES00 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ube4bQ9ES00 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.39■□□□□ 0.86
Ube4bQ9ES00 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ube4bQ9ES00 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ube4bQ9ES00 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ube4bQ9ES00 Gm6821-201ENSMUST00000107540 542 ntBASIC20.39■□□□□ 0.85
Ube4bQ9ES00 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ube4bQ9ES00 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ube4bQ9ES00 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ube4bQ9ES00 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ube4bQ9ES00 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ube4bQ9ES00 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Ube4bQ9ES00 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.38■□□□□ 0.85
Ube4bQ9ES00 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ube4bQ9ES00 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.37■□□□□ 0.85
Ube4bQ9ES00 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ube4bQ9ES00 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.37■□□□□ 0.85
Ube4bQ9ES00 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ube4bQ9ES00 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ube4bQ9ES00 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ube4bQ9ES00 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ube4bQ9ES00 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ube4bQ9ES00 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 120.5 ms