Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lime1Q9EQR5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lime1Q9EQR5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lime1Q9EQR5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lime1Q9EQR5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lime1Q9EQR5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Lime1Q9EQR5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lime1Q9EQR5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lime1Q9EQR5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lime1Q9EQR5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Lime1Q9EQR5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lime1Q9EQR5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lime1Q9EQR5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lime1Q9EQR5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lime1Q9EQR5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lime1Q9EQR5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Lime1Q9EQR5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.76■□□□□ 0.59
Lime1Q9EQR5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lime1Q9EQR5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lime1Q9EQR5 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.75■□□□□ 0.59
Lime1Q9EQR5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lime1Q9EQR5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Lime1Q9EQR5 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Lime1Q9EQR5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lime1Q9EQR5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lime1Q9EQR5 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lime1Q9EQR5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lime1Q9EQR5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lime1Q9EQR5 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.74■□□□□ 0.59
Lime1Q9EQR5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lime1Q9EQR5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lime1Q9EQR5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lime1Q9EQR5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lime1Q9EQR5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lime1Q9EQR5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lime1Q9EQR5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lime1Q9EQR5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lime1Q9EQR5 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Lime1Q9EQR5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Lime1Q9EQR5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Lime1Q9EQR5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lime1Q9EQR5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lime1Q9EQR5 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.71■□□□□ 0.59
Lime1Q9EQR5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lime1Q9EQR5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lime1Q9EQR5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.71■□□□□ 0.59
Lime1Q9EQR5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
Lime1Q9EQR5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lime1Q9EQR5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Lime1Q9EQR5 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Lime1Q9EQR5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lime1Q9EQR5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lime1Q9EQR5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.7■□□□□ 0.58
Lime1Q9EQR5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lime1Q9EQR5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lime1Q9EQR5 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lime1Q9EQR5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lime1Q9EQR5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lime1Q9EQR5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lime1Q9EQR5 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.69■□□□□ 0.58
Lime1Q9EQR5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.69■□□□□ 0.58
Lime1Q9EQR5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Lime1Q9EQR5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lime1Q9EQR5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lime1Q9EQR5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lime1Q9EQR5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lime1Q9EQR5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lime1Q9EQR5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lime1Q9EQR5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lime1Q9EQR5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.68■□□□□ 0.58
Lime1Q9EQR5 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lime1Q9EQR5 Gm6311-201ENSMUST00000073790 878 ntBASIC18.68■□□□□ 0.58
Lime1Q9EQR5 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lime1Q9EQR5 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Lime1Q9EQR5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lime1Q9EQR5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
Lime1Q9EQR5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lime1Q9EQR5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lime1Q9EQR5 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lime1Q9EQR5 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lime1Q9EQR5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lime1Q9EQR5 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.67■□□□□ 0.58
Lime1Q9EQR5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lime1Q9EQR5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lime1Q9EQR5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lime1Q9EQR5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lime1Q9EQR5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Lime1Q9EQR5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.66■□□□□ 0.58
Lime1Q9EQR5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lime1Q9EQR5 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lime1Q9EQR5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lime1Q9EQR5 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.65■□□□□ 0.58
Lime1Q9EQR5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lime1Q9EQR5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lime1Q9EQR5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lime1Q9EQR5 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lime1Q9EQR5 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lime1Q9EQR5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lime1Q9EQR5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lime1Q9EQR5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 8 ms